Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M17
(567 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. 45 2e-04
BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. 45 2e-04
AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. 45 2e-04
AF294429-1|AAG10074.1| 481|Homo sapiens protein serine threonin... 44 5e-04
L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein. 39 0.011
BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein. 39 0.011
BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein. 39 0.011
AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2 prot... 39 0.011
AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2 prot... 39 0.011
AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2 prot... 39 0.011
AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein. 39 0.011
BC022025-1|AAH22025.1| 493|Homo sapiens CLK2P protein protein. 38 0.033
L29217-1|AAA61484.1| 490|Homo sapiens clk3 protein. 35 0.17
BT006993-1|AAP35639.1| 490|Homo sapiens CDC-like kinase 3 protein. 35 0.17
BC019881-1|AAH19881.1| 490|Homo sapiens CLK3 protein protein. 35 0.17
BC002555-1|AAH02555.1| 490|Homo sapiens CDC-like kinase 3 protein. 35 0.17
AB209535-1|BAD92772.1| 565|Homo sapiens Dual specificity protei... 35 0.17
J03161-1|AAA36647.1| 508|Homo sapiens protein ( Human serum res... 34 0.40
BC052572-1|AAH52572.1| 508|Homo sapiens serum response factor (... 34 0.40
BC048211-1|AAH48211.1| 508|Homo sapiens serum response factor (... 34 0.40
AL355385-5|CAI13785.1| 508|Homo sapiens serum response factor (... 34 0.40
AL133375-5|CAI20207.1| 508|Homo sapiens serum response factor (... 34 0.40
AK130819-1|BAC85438.1| 328|Homo sapiens protein ( Homo sapiens ... 31 2.8
U38996-1|AAB18373.1| 269|Homo sapiens pre TCR alpha protein. 30 4.9
U36759-1|AAB06194.1| 281|Homo sapiens pre-T cell receptor alpha... 30 4.9
BC100774-1|AAI00775.1| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
BC100773-1|AAI00774.1| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
BC100772-1|AAI00773.1| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
BC100771-1|AAI00772.1| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
BC069336-1|AAH69336.1| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
AL035587-2|CAI21484.2| 281|Homo sapiens pre T-cell antigen rece... 30 4.9
AF165312-1|AAF89556.1| 256|Homo sapiens pre-T-cell receptor alp... 30 4.9
AF101436-1|AAF21890.1| 174|Homo sapiens pre-T cell receptor alp... 30 4.9
AF084941-1|AAC83346.1| 281|Homo sapiens pre-T cell receptor alp... 30 4.9
AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens ... 29 8.6
>L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein.
Length = 484
Score = 44.8 bits (101), Expect = 2e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD++GHL+ G V+ ARY+I+DTLGEG
Sbjct: 141 VEDDEEGHLICQSGDVLSARYEIVDTLGEG 170
>BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein.
Length = 484
Score = 44.8 bits (101), Expect = 2e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD++GHL+ G V+ ARY+I+DTLGEG
Sbjct: 141 VEDDEEGHLICQSGDVLSARYEIVDTLGEG 170
>AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein.
Length = 484
Score = 44.8 bits (101), Expect = 2e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD++GHL+ G V+ ARY+I+DTLGEG
Sbjct: 141 VEDDEEGHLICQSGDVLSARYEIVDTLGEG 170
>AF294429-1|AAG10074.1| 481|Homo sapiens protein serine threonine
kinase Clk4 protein.
Length = 481
Score = 43.6 bits (98), Expect = 5e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
++DD++GHL+ G V+ ARY+I+DTLGEG
Sbjct: 139 IEDDEEGHLICQSGDVLRARYEIVDTLGEG 168
>L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 143 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 172
>BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 143 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 172
>BC014067-1|AAH14067.1| 498|Homo sapiens CDC-like kinase 2 protein.
Length = 498
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 142 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 171
>AL713999-30|CAI95098.1| 498|Homo sapiens CDC-like kinase 2
protein.
Length = 498
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 142 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 171
>AL713999-29|CAI95097.1| 497|Homo sapiens CDC-like kinase 2
protein.
Length = 497
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 141 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 170
>AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2
protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 143 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 172
>AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein.
Length = 499
Score = 39.1 bits (87), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLGEG
Sbjct: 143 VEDDAEGHLIYHVGDWLQERYEIVSTLGEG 172
>BC022025-1|AAH22025.1| 493|Homo sapiens CLK2P protein protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.033
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DD +GHL+Y G + RY+I+ TLG+G
Sbjct: 138 VEDDTEGHLIYHVGDWLQERYEIVSTLGKG 167
>L29217-1|AAA61484.1| 490|Homo sapiens clk3 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DDK+GHLV G + RY+I+ LGEG
Sbjct: 136 VEDDKEGHLVCRIGDWLQERYEIVGNLGEG 165
>BT006993-1|AAP35639.1| 490|Homo sapiens CDC-like kinase 3 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DDK+GHLV G + RY+I+ LGEG
Sbjct: 136 VEDDKEGHLVCRIGDWLQERYEIVGNLGEG 165
>BC019881-1|AAH19881.1| 490|Homo sapiens CLK3 protein protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DDK+GHLV G + RY+I+ LGEG
Sbjct: 136 VEDDKEGHLVCRIGDWLQERYEIVGNLGEG 165
>BC002555-1|AAH02555.1| 490|Homo sapiens CDC-like kinase 3 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DDK+GHLV G + RY+I+ LGEG
Sbjct: 136 VEDDKEGHLVCRIGDWLQERYEIVGNLGEG 165
>AB209535-1|BAD92772.1| 565|Homo sapiens Dual specificity protein
kinase CLK3 variant protein.
Length = 565
Score = 35.1 bits (77), Expect = 0.17
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 462 VKDDKDGHLVYWPGYVMGARYKIIDTLGEG 551
V+DDK+GHLV G + RY+I+ LGEG
Sbjct: 211 VEDDKEGHLVCRIGDWLQERYEIVGNLGEG 240
>J03161-1|AAA36647.1| 508|Homo sapiens protein ( Human serum
response factor (SRF) mRNA, complete cds. ).
Length = 508
Score = 33.9 bits (74), Expect = 0.40
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 247 VALMMVPQRFHTENGAVAENVKARSIRGGGEMNVPNDHTTGDHLHLTDGGDIIATNHLRG 426
V+ + P + NG V ++ + + GG M +P T L GG + ++
Sbjct: 306 VSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFT------LMPGGAVAQQVPVQA 359
Query: 427 HPQNRAPGHAPPSRTTRTDIWST 495
++AP A PSR + TD+ T
Sbjct: 360 IQVHQAPQQASPSRDSSTDLTQT 382
>BC052572-1|AAH52572.1| 508|Homo sapiens serum response factor
(c-fos serum response element-binding transcription
facto protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.40
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 247 VALMMVPQRFHTENGAVAENVKARSIRGGGEMNVPNDHTTGDHLHLTDGGDIIATNHLRG 426
V+ + P + NG V ++ + + GG M +P T L GG + ++
Sbjct: 306 VSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFT------LMPGGAVAQQVPVQA 359
Query: 427 HPQNRAPGHAPPSRTTRTDIWST 495
++AP A PSR + TD+ T
Sbjct: 360 IQVHQAPQQASPSRDSSTDLTQT 382
>BC048211-1|AAH48211.1| 508|Homo sapiens serum response factor
(c-fos serum response element-binding transcription
facto protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.40
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 247 VALMMVPQRFHTENGAVAENVKARSIRGGGEMNVPNDHTTGDHLHLTDGGDIIATNHLRG 426
V+ + P + NG V ++ + + GG M +P T L GG + ++
Sbjct: 306 VSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFT------LMPGGAVAQQVPVQA 359
Query: 427 HPQNRAPGHAPPSRTTRTDIWST 495
++AP A PSR + TD+ T
Sbjct: 360 IQVHQAPQQASPSRDSSTDLTQT 382
>AL355385-5|CAI13785.1| 508|Homo sapiens serum response factor
(c-fos serum response element-binding transcription
facto protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.40
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 247 VALMMVPQRFHTENGAVAENVKARSIRGGGEMNVPNDHTTGDHLHLTDGGDIIATNHLRG 426
V+ + P + NG V ++ + + GG M +P T L GG + ++
Sbjct: 306 VSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFT------LMPGGAVAQQVPVQA 359
Query: 427 HPQNRAPGHAPPSRTTRTDIWST 495
++AP A PSR + TD+ T
Sbjct: 360 IQVHQAPQQASPSRDSSTDLTQT 382
>AL133375-5|CAI20207.1| 508|Homo sapiens serum response factor
(c-fos serum response element-binding transcription
facto protein.
Length = 508
Score = 33.9 bits (74), Expect = 0.40
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 247 VALMMVPQRFHTENGAVAENVKARSIRGGGEMNVPNDHTTGDHLHLTDGGDIIATNHLRG 426
V+ + P + NG V ++ + + GG M +P T L GG + ++
Sbjct: 306 VSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFT------LMPGGAVAQQVPVQA 359
Query: 427 HPQNRAPGHAPPSRTTRTDIWST 495
++AP A PSR + TD+ T
Sbjct: 360 IQVHQAPQQASPSRDSSTDLTQT 382
>AK130819-1|BAC85438.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ27309 fis, clone TMS06203. ).
Length = 328
Score = 31.1 bits (67), Expect = 2.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 203 GSHRLHPATESGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 252
>U38996-1|AAB18373.1| 269|Homo sapiens pre TCR alpha protein.
Length = 269
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 180 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 229
>U36759-1|AAB06194.1| 281|Homo sapiens pre-T cell receptor
alpha-type chain precursor protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>BC100774-1|AAI00775.1| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>BC100773-1|AAI00774.1| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>BC100772-1|AAI00773.1| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>BC100771-1|AAI00772.1| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>BC069336-1|AAH69336.1| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>AL035587-2|CAI21484.2| 281|Homo sapiens pre T-cell antigen
receptor alpha protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>AF165312-1|AAF89556.1| 256|Homo sapiens pre-T-cell receptor alpha
chain protein.
Length = 256
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 167 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 216
>AF101436-1|AAF21890.1| 174|Homo sapiens pre-T cell receptor alpha
chain precursor protein.
Length = 174
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 85 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 134
>AF084941-1|AAC83346.1| 281|Homo sapiens pre-T cell receptor alpha
chain 1 precursor protein.
Length = 281
Score = 30.3 bits (65), Expect = 4.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 367 GDH-LH-LTDGGDIIATNHLRGHPQNRAPGHAPPSRTTRTDIWSTGLDMS 510
G H LH T+ G AT+ R P++R G PP R + +W G +S
Sbjct: 192 GSHRLHPATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLS 241
>AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens
cDNA FLJ44112 fis, clone TESTI4046282. ).
Length = 1197
Score = 29.5 bits (63), Expect = 8.6
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 155 NAYLSSLSLNSRKYFNLH 102
N +L +SLN+R+YFN+H
Sbjct: 790 NEFLDPISLNAREYFNIH 807
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,644,574
Number of Sequences: 237096
Number of extensions: 1337557
Number of successful extensions: 3370
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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