BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M16
(577 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 233 2e-61
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 233 2e-61
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 57 1e-08
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 57 1e-08
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 57 1e-08
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 57 1e-08
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 57 1e-08
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 54 1e-07
AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 37 0.022
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro... 32 0.64
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh... 32 0.64
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua... 32 0.64
AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE... 32 0.64
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF... 32 0.64
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD... 32 0.64
AY102688-1|AAM27517.1| 252|Drosophila melanogaster LD25993p pro... 31 1.5
AE013599-1107|AAF58793.2| 415|Drosophila melanogaster CG18377-P... 31 1.5
AE013599-1106|AAM68760.2| 589|Drosophila melanogaster CG18377-P... 31 1.5
AE013599-1105|AAF58791.3| 589|Drosophila melanogaster CG18377-P... 31 1.5
AY075453-1|AAL68266.1| 589|Drosophila melanogaster RE11411p pro... 30 2.0
BT022816-1|AAY55232.1| 600|Drosophila melanogaster IP13170p pro... 29 4.5
AE014298-2821|AAF48938.1| 600|Drosophila melanogaster CG14196-P... 29 4.5
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 233 bits (569), Expect = 2e-61
Identities = 113/134 (84%), Positives = 120/134 (89%)
Frame = +2
Query: 77 AQSTVNHRREQRLGHKEFKKPTWVPDGRRNPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 256
A+ VNHRR+QR K++KK + NPFGGASHAKGIVLEKVGVEAKQPNSAIRKC
Sbjct: 10 ARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 69
Query: 257 VRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 436
VRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS
Sbjct: 70 VRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 129
Query: 437 LLALYKEKKERPRS 478
LLALYKEKKERPRS
Sbjct: 130 LLALYKEKKERPRS 143
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 233 bits (569), Expect = 2e-61
Identities = 113/134 (84%), Positives = 120/134 (89%)
Frame = +2
Query: 77 AQSTVNHRREQRLGHKEFKKPTWVPDGRRNPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 256
A+ VNHRR+QR K++KK + NPFGGASHAKGIVLEKVGVEAKQPNSAIRKC
Sbjct: 10 ARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 69
Query: 257 VRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 436
VRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS
Sbjct: 70 VRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 129
Query: 437 LLALYKEKKERPRS 478
LLALYKEKKERPRS
Sbjct: 130 LLALYKEKKERPRS 143
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G ++++E+
Sbjct: 49 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEH 105
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 106 N-IVLCRVGR----LQDVPGVKLKAVR 127
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G ++++E+
Sbjct: 49 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEH 105
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 106 N-IVLCRVGR----LQDVPGVKLKAVR 127
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G ++++E+
Sbjct: 49 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEH 105
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 106 N-IVLCRVGR----LQDVPGVKLKAVR 127
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G ++++E+
Sbjct: 63 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEH 119
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 120 N-IVLCRVGR----LQDVPGVKLKAVR 141
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G ++++E+
Sbjct: 49 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEH 105
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 106 N-IVLCRVGR----LQDVPGVKLKAVR 127
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +2
Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
R P G AKG+VL+ + + K+PNSA RKCV V+ GK++ A++P G ++++E+
Sbjct: 49 RQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIP--GIGHNLQEH 105
Query: 341 DEVLVAGFGRKGHAVGDIPGVRFKVVK 421
+ +++ GR + D+PGV+ K V+
Sbjct: 106 N-IVLCRVGR----LQDVPGVKLKAVR 127
>AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA
protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 110 RLGHKEFKKPTWVPDGRRNPFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 277
RLG F+ P +P R PFG + +VLE+ G K Q IRKCV + +K
Sbjct: 104 RLGDFNFQLPENLPATCRLPFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161
>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p protein.
Length = 2555
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1921 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1965
>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRhoGEF2
protein.
Length = 2559
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative guanine
nucleotide exchangefactor RhoGEF2 protein.
Length = 2559
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE,
isoform E protein.
Length = 2205
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1571 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1615
>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
isoform F protein.
Length = 2559
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
isoform D protein.
Length = 2559
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 426 ATLTTLNLTPGMSPTAWPLRPNPATNTSSFSSM---WLRQPSRGTNA 295
ATLTT L P M P A + P PATN S+ SS+ LR P R A
Sbjct: 1925 ATLTTTPLAP-MLPIA-TVTPAPATNNSNVSSLTGVQLRNPQRDATA 1969
>AY102688-1|AAM27517.1| 252|Drosophila melanogaster LD25993p
protein.
Length = 252
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2
Query: 390 SPTAWPLRPNPATNTSSFSSMWLRQPSR----GTNAVTFLPFLMSCTRTHLRMAEFGCLA 223
S T + L NP F + P R N + +P+L +C + LRM
Sbjct: 62 SSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPV---- 117
Query: 222 STPTFSRTMPLA*DAPPKGFRLPSGTHVGF 133
+ L DA G+ +P GTHV F
Sbjct: 118 ---VIANGRSLQSDAVINGYHVPKGTHVIF 144
>AE013599-1107|AAF58793.2| 415|Drosophila melanogaster CG18377-PC,
isoform C protein.
Length = 415
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2
Query: 390 SPTAWPLRPNPATNTSSFSSMWLRQPSR----GTNAVTFLPFLMSCTRTHLRMAEFGCLA 223
S T + L NP F + P R N + +P+L +C + LRM
Sbjct: 225 SSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPV---- 280
Query: 222 STPTFSRTMPLA*DAPPKGFRLPSGTHVGF 133
+ L DA G+ +P GTHV F
Sbjct: 281 ---VIANGRSLQSDAVINGYHVPKGTHVIF 307
>AE013599-1106|AAM68760.2| 589|Drosophila melanogaster CG18377-PD,
isoform D protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2
Query: 390 SPTAWPLRPNPATNTSSFSSMWLRQPSR----GTNAVTFLPFLMSCTRTHLRMAEFGCLA 223
S T + L NP F + P R N + +P+L +C + LRM
Sbjct: 399 SSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPV---- 454
Query: 222 STPTFSRTMPLA*DAPPKGFRLPSGTHVGF 133
+ L DA G+ +P GTHV F
Sbjct: 455 ---VIANGRSLQSDAVINGYHVPKGTHVIF 481
>AE013599-1105|AAF58791.3| 589|Drosophila melanogaster CG18377-PA,
isoform A protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2
Query: 390 SPTAWPLRPNPATNTSSFSSMWLRQPSR----GTNAVTFLPFLMSCTRTHLRMAEFGCLA 223
S T + L NP F + P R N + +P+L +C + LRM
Sbjct: 399 SSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPV---- 454
Query: 222 STPTFSRTMPLA*DAPPKGFRLPSGTHVGF 133
+ L DA G+ +P GTHV F
Sbjct: 455 ---VIANGRSLQSDAVINGYHVPKGTHVIF 481
>AY075453-1|AAL68266.1| 589|Drosophila melanogaster RE11411p
protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = -2
Query: 390 SPTAWPLRPNPATNTSSFSSMWLRQPSR----GTNAVTFLPFLMSCTRTHLRMAEFGCLA 223
S T + L NP F + P R N + +P+L +C + LRM
Sbjct: 399 SSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPV---- 454
Query: 222 STPTFSRTMPLA*DAPPKGFRLPSGTHVGF 133
+ L DA G+ +P GTHV F
Sbjct: 455 ---VIANGRNLQSDAVINGYHVPKGTHVIF 481
>BT022816-1|AAY55232.1| 600|Drosophila melanogaster IP13170p
protein.
Length = 600
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2
Query: 528 RLPAAAAGHSLITM*TYDLGLSFFSLYRARSDTFATLTTLNLTPGMSPTAWPL 370
RLP A+ LI+ +G F L R R D TL LN+ ++ T+W L
Sbjct: 532 RLPGASGLQLLISGLFTLIGGPFVGLVRDRYDYSVTLHCLNMMSFVAATSWSL 584
>AE014298-2821|AAF48938.1| 600|Drosophila melanogaster CG14196-PA
protein.
Length = 600
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2
Query: 528 RLPAAAAGHSLITM*TYDLGLSFFSLYRARSDTFATLTTLNLTPGMSPTAWPL 370
RLP A+ LI+ +G F L R R D TL LN+ ++ T+W L
Sbjct: 532 RLPGASGLQLLISGLFTLIGGPFVGLVRDRYDYSVTLHCLNMMSFVAATSWSL 584
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,527,073
Number of Sequences: 53049
Number of extensions: 626271
Number of successful extensions: 1441
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -