Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M16
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   216   8e-57
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase pro...    27   7.2  
AF067944-4|AAC17670.2|  279|Caenorhabditis elegans Hypothetical ...    27   7.2  
AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kin...    27   7.2  
U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  216 bits (528), Expect = 8e-57
 Identities = 102/134 (76%), Positives = 113/134 (84%)
 Frame = +2

Query: 77  AQSTVNHRREQRLGHKEFKKPTWVPDGRRNPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 256
           A+    HR+EQR   K +KK       + NPFGGASHAKGIVLEK+GVEAKQPNSAIRKC
Sbjct: 10  ARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKC 69

Query: 257 VRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVS 436
           VRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPGVRFK+VKVAN S
Sbjct: 70  VRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTS 129

Query: 437 LLALYKEKKERPRS 478
           L+AL+K KKERPRS
Sbjct: 130 LIALFKGKKERPRS 143


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = +2

Query: 161 RNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEN 340
           ++   G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++P  G  ++++E+
Sbjct: 67  KSAISGYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEH 123

Query: 341 DEVLVAGFGRK 373
            +VLV G GR+
Sbjct: 124 SQVLVKG-GRR 133


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 293 TAFVPRDGCLNHIEEN 340
           T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase
           protein 3 protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 436 RHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHE 299
           R++   +H   DS+NV     FT E C+ + ++ LN     +T HE
Sbjct: 93  RNIVQFHHFFEDSQNVY----FTLELCSKNSLMELNKQRGPLTEHE 134


>AF067944-4|AAC17670.2|  279|Caenorhabditis elegans Hypothetical
           protein K10C9.3 protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 183 DAPPKGFRLPSGTHVGFLNSLWPN 112
           D+ P+   +PSGT    ++ LWPN
Sbjct: 42  DSVPESCEIPSGTPQWSIHGLWPN 65


>AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kinase
           protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 436 RHVCYLNHLKSDSRNVTNSVAFTTESCN*HLIVLLNVVEATITRHE 299
           R++   +H   DS+NV     FT E C+ + ++ LN     +T HE
Sbjct: 93  RNIVQFHHFFEDSQNVY----FTLELCSKNSLMELNKQRGPLTEHE 134


>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +2

Query: 83  STVNHRREQRLGHKEFKKPTWVPDGRRNPFGGASHAKGIVLEKVGVEAKQPNS 241
           ST +H +E   G KE  +     D  R   G   H K  V EKV  E   P S
Sbjct: 488 STSDHSKENERGRKEDGREK---DDFREDHGREDHGKSEVPEKVEHEQHPPQS 537


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,232
Number of Sequences: 27780
Number of extensions: 303298
Number of successful extensions: 670
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)