Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M15
         (515 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056884-1|AAH56884.1|  146|Homo sapiens C7orf44 protein protein.      51   2e-06
AK023053-1|BAB14379.1|  146|Homo sapiens protein ( Homo sapiens ...    51   2e-06
AK023007-1|BAB14356.1|  146|Homo sapiens protein ( Homo sapiens ...    51   2e-06
AK001665-1|BAA91821.1|  146|Homo sapiens protein ( Homo sapiens ...    51   2e-06
AK021905-1|BAB13932.1|  146|Homo sapiens protein ( Homo sapiens ...    51   3e-06
M34678-1|AAA52857.1|  124|Homo sapiens IGHM protein.                   31   1.8  

>BC056884-1|AAH56884.1|  146|Homo sapiens C7orf44 protein protein.
          Length = 146

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +3

Query: 162 GLVVSGTGFYLQHRIVDRVRNYD-YYKSALKTLRNHSGAVHYLGEPMKDKRFKLSDKENN 338
           G+  +G GF + + ++ +  +   YYK A++ L++H  A   LG P+     KL D+E N
Sbjct: 23  GVFYAG-GFAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRE-N 80

Query: 339 FSDGENARFCIPVYGPKDKGTFYFWAERVDNI--WNITKAELDLK 467
           F D  +A+  IPV G K +G  Y  + R      W++ +  L+LK
Sbjct: 81  FVDIVDAKLKIPVSGSKSEGLLYVHSSRGGPFQRWHLDEVFLELK 125


>AK023053-1|BAB14379.1|  146|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12991 fis, clone NT2RP3000134. ).
          Length = 146

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +3

Query: 162 GLVVSGTGFYLQHRIVDRVRNYD-YYKSALKTLRNHSGAVHYLGEPMKDKRFKLSDKENN 338
           G+  +G GF + + ++ +  +   YYK A++ L++H  A   LG P+     KL D+E N
Sbjct: 23  GVFYAG-GFAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRE-N 80

Query: 339 FSDGENARFCIPVYGPKDKGTFYFWAERVDNI--WNITKAELDLK 467
           F D  +A+  IPV G K +G  Y  + R      W++ +  L+LK
Sbjct: 81  FVDIVDAKLKIPVSGSKSEGLLYVHSSRGGPFQRWHLDEVFLELK 125


>AK023007-1|BAB14356.1|  146|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12945 fis, clone NT2RP2005227. ).
          Length = 146

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +3

Query: 162 GLVVSGTGFYLQHRIVDRVRNYD-YYKSALKTLRNHSGAVHYLGEPMKDKRFKLSDKENN 338
           G+  +G GF + + ++ +  +   YYK A++ L++H  A   LG P+     KL D+E N
Sbjct: 23  GVFYAG-GFAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRE-N 80

Query: 339 FSDGENARFCIPVYGPKDKGTFYFWAERVDNI--WNITKAELDLK 467
           F D  +A+  IPV G K +G  Y  + R      W++ +  L+LK
Sbjct: 81  FVDIVDAKLKIPVSGSKSEGLLYVHSSRGGPFQRWHLDEVFLELK 125


>AK001665-1|BAA91821.1|  146|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10803 fis, clone NT2RP4000833. ).
          Length = 146

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
 Frame = +3

Query: 162 GLVVSGTGFYLQHRIVDRVRNYD-YYKSALKTLRNHSGAVHYLGEPMKDKRFKLSDKENN 338
           G+  +G GF + + ++ +  +   YYK A++ L++H  A   LG P+     KL D+E N
Sbjct: 23  GVFYAG-GFAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRE-N 80

Query: 339 FSDGENARFCIPVYGPKDKGTFYFWAERVDNI--WNITKAELDLK 467
           F D  +A+  IPV G K +G  Y  + R      W++ +  L+LK
Sbjct: 81  FVDIVDAKLKIPVSGSKSEGLLYVHSSRGGPFQRWHLDEVFLELK 125


>AK021905-1|BAB13932.1|  146|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11843 fis, clone HEMBA1006659. ).
          Length = 146

 Score = 50.8 bits (116), Expect = 3e-06
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = +3

Query: 162 GLVVSGTGFYLQHRIVDRVRNYD-YYKSALKTLRNHSGAVHYLGEPMKDKRFKLSDKENN 338
           G+  +G GF + + ++ +  +   YYK A++ L++H  A   LG P+     KL D+E N
Sbjct: 23  GVFYAG-GFAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRE-N 80

Query: 339 FSDGENARFCIPVYGPKDKGTFYFWAERVDNI--WNITKAELDLK 467
           F D  +A+  IPV G K +G  Y  + R      W + +  L+LK
Sbjct: 81  FVDIVDAKLKIPVSGSKSEGLLYVHSSRGGPFQRWRLDEVFLELK 125


>M34678-1|AAA52857.1|  124|Homo sapiens IGHM protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 114 DMTISTRTLVQIAAWGGLVVSGTGFYLQHRIVDRVRNYDYY 236
           D +IST +L     WG L  S TG Y   R++   R+Y YY
Sbjct: 73  DKSISTASL----QWGSLKASDTGIYYCARLITGPRHYYYY 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,114,509
Number of Sequences: 237096
Number of extensions: 1332026
Number of successful extensions: 1895
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1890
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)