Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M15
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   4.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   10.0 

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 321 SDKENNFSDGENARFCIPVYGPKDKGTFYFWAERVDNI 434
           S  E+NF    N RF +   G      F  +   VDN+
Sbjct: 592 SQTEDNFGPLSNVRFAVFALGSSAYPNFCAFGRYVDNL 629


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 414 AERVDNIWNITKAELDL 464
           A  V+NIW+ T + L+L
Sbjct: 408 APEVENIWDYTPSSLEL 424


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 216 VRNYDYYKSALKTLRNHSGAVHYLGEPMKDKRFK 317
           + NY Y+    K LRN    +  L    K++R +
Sbjct: 5   ISNYSYHDEKFKQLRNEDNKID-LRSRTKEERLQ 37


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 216 VRNYDYYKSALKTLRNHSGAVHYLGEPMKDKRFK 317
           + NY Y+    K LRN    +  L    K++R +
Sbjct: 5   ISNYSYHDEKFKQLRNEDNKID-LRSRTKEERLQ 37


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 221 SDSIHNPML*IEARPANHETSPS 153
           +D IHN ++  EA P +   SPS
Sbjct: 724 TDIIHNYIMRGEASPRSPNASPS 746


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/26 (23%), Positives = 18/26 (69%)
 Frame = -3

Query: 267 NDFSRFSRRSCNNHSF*LYPQSDVVN 190
           N+++ ++  + NN++  LY ++ ++N
Sbjct: 328 NNYNNYNNNNYNNYNKKLYYKNYIIN 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,311
Number of Sequences: 438
Number of extensions: 2946
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)