Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M13
         (98 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098343-1|AAH98343.1|  537|Homo sapiens protein phosphatase 2C,...    54   9e-08
BC064978-1|AAH64978.1|  606|Homo sapiens PPM2C protein protein.        54   9e-08
BC047619-1|AAH47619.1|  537|Homo sapiens protein phosphatase 2C,...    54   9e-08
AF155661-1|AAF67480.1|  574|Homo sapiens pyruvate dehydrogenase ...    54   9e-08
BC028030-1|AAH28030.1|  529|Homo sapiens pyruvate dehydrogenase ...    45   4e-05
AB037769-1|BAA92586.1|  545|Homo sapiens KIAA1348 protein protein.     45   4e-05

>BC098343-1|AAH98343.1|  537|Homo sapiens protein phosphatase 2C,
           magnesium-dependent, catalytic subunit protein.
          Length = 537

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   TKAVPANYHTPPYLTARTDVYYHRLTTKDKFL 98
           TK +P NYHTPPYLTA  +V YHRL  +DKFL
Sbjct: 382 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFL 413


>BC064978-1|AAH64978.1|  606|Homo sapiens PPM2C protein protein.
          Length = 606

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   TKAVPANYHTPPYLTARTDVYYHRLTTKDKFL 98
           TK +P NYHTPPYLTA  +V YHRL  +DKFL
Sbjct: 451 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFL 482


>BC047619-1|AAH47619.1|  537|Homo sapiens protein phosphatase 2C,
           magnesium-dependent, catalytic subunit protein.
          Length = 537

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   TKAVPANYHTPPYLTARTDVYYHRLTTKDKFL 98
           TK +P NYHTPPYLTA  +V YHRL  +DKFL
Sbjct: 382 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFL 413


>AF155661-1|AAF67480.1|  574|Homo sapiens pyruvate dehydrogenase
           protein.
          Length = 574

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +3

Query: 3   TKAVPANYHTPPYLTARTDVYYHRLTTKDKFL 98
           TK +P NYHTPPYLTA  +V YHRL  +DKFL
Sbjct: 418 TKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFL 449


>BC028030-1|AAH28030.1|  529|Homo sapiens pyruvate dehydrogenase
           phosphatase isoenzyme 2 protein.
          Length = 529

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 15  PANYHTPPYLTARTDVYYHRLTTKDKFL 98
           P +Y+TPPYLTA  +V YHRL  +DKFL
Sbjct: 380 PPHYYTPPYLTAEPEVTYHRLRPQDKFL 407


>AB037769-1|BAA92586.1|  545|Homo sapiens KIAA1348 protein protein.
          Length = 545

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 15  PANYHTPPYLTARTDVYYHRLTTKDKFL 98
           P +Y+TPPYLTA  +V YHRL  +DKFL
Sbjct: 396 PPHYYTPPYLTAEPEVTYHRLRPQDKFL 423


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,552,798
Number of Sequences: 237096
Number of extensions: 147783
Number of successful extensions: 320
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 76,859,062
effective HSP length: 13
effective length of database: 73,776,814
effective search space used: 1401759466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)