SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M11
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024287-1|ABC86349.1|  968|Drosophila melanogaster IP13633p pro...    93   3e-19
AE014134-1894|AAF52957.1|  950|Drosophila melanogaster CG5322-PA...    93   3e-19
AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241...    91   8e-19
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB...    91   8e-19
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA...    91   8e-19
AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p pro...    80   2e-15
AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA...    80   2e-15
AY119107-1|AAM50967.1| 1007|Drosophila melanogaster RE08556p pro...    79   5e-15
AE014134-1563|AAF52711.2| 1007|Drosophila melanogaster CG9468-PA...    79   5e-15
AE014134-1561|AAF52709.1|  942|Drosophila melanogaster CG9465-PA...    73   2e-13
AE014134-1560|AAF52708.2| 1003|Drosophila melanogaster CG9463-PA...    64   1e-10
AY071249-1|AAL48871.2| 1016|Drosophila melanogaster RE28991p pro...    62   6e-10
X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi...    56   4e-08
AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p pro...    56   4e-08
AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster alpha-mannos...    56   4e-08
AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA...    56   4e-08
AE014297-2087|AAF55228.2| 1249|Drosophila melanogaster CG4606-PA...    53   2e-07
AB120954-1|BAC92711.1| 1249|Drosophila melanogaster alpha-mannos...    53   2e-07
AB018079-1|BAA75817.1| 1249|Drosophila melanogaster alpha-mannos...    53   2e-07
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA...    31   1.2  
AY089435-1|AAL90173.1|  400|Drosophila melanogaster AT25434p pro...    28   6.6  
AE014297-3779|AAN14049.1|  400|Drosophila melanogaster CG31099-P...    28   6.6  

>BT024287-1|ABC86349.1|  968|Drosophila melanogaster IP13633p
           protein.
          Length = 968

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYPV  +I +++D++R T+L DRA GG SL +GE++LM+HRRLL+DDAFGVGEALNET
Sbjct: 729 GNYYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELMLHRRLLNDDAFGVGEALNET 788

Query: 256 VLG 264
             G
Sbjct: 789 QYG 791


>AE014134-1894|AAF52957.1|  950|Drosophila melanogaster CG5322-PA
           protein.
          Length = 950

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 40/63 (63%), Positives = 52/63 (82%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYPV  +I +++D++R T+L DRA GG SL +GE++LM+HRRLL+DDAFGVGEALNET
Sbjct: 711 GNYYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELMLHRRLLNDDAFGVGEALNET 770

Query: 256 VLG 264
             G
Sbjct: 771 QYG 773


>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
           protein.
          Length = 1080

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYP+  +I +E+D  R  +LTDRA GG+SL +G ++LMVHRRLL DDAFGVGEALNET
Sbjct: 769 GNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNET 828

Query: 256 VLGN 267
             G+
Sbjct: 829 EYGD 832



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 363  FVSDAKEIILENW-LQMNNYQTFASKTLPDGLHLLTLEPRGDDLLLL 500
            F S+ ++   + W     N  +  S  LP  +HLLTLEP  ++ LL+
Sbjct: 873  FFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLV 919


>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
           isoform B protein.
          Length = 1080

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYP+  +I +E+D  R  +LTDRA GG+SL +G ++LMVHRRLL DDAFGVGEALNET
Sbjct: 769 GNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNET 828

Query: 256 VLGN 267
             G+
Sbjct: 829 EYGD 832



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 363  FVSDAKEIILENW-LQMNNYQTFASKTLPDGLHLLTLEPRGDDLLLL 500
            F S+ ++   + W     N  +  S  LP  +HLLTLEP  ++ LL+
Sbjct: 873  FFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLV 919


>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
           isoform A protein.
          Length = 1080

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 40/64 (62%), Positives = 50/64 (78%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYP+  +I +E+D  R  +LTDRA GG+SL +G ++LMVHRRLL DDAFGVGEALNET
Sbjct: 769 GNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNET 828

Query: 256 VLGN 267
             G+
Sbjct: 829 EYGD 832



 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 363  FVSDAKEIILENW-LQMNNYQTFASKTLPDGLHLLTLEPRGDDLLLL 500
            F S+ ++   + W     N  +  S  LP  +HLLTLEP  ++ LL+
Sbjct: 873  FFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLV 919


>AY058271-1|AAL13500.1|  982|Drosophila melanogaster GH02475p
           protein.
          Length = 982

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 32/63 (50%), Positives = 47/63 (74%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYP+ + I +++ ++R  +L DRA GG S+ +G+I+LM+HRRL+ DD +GVGEALNE 
Sbjct: 744 GNYYPITSRIALQDSNKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEE 803

Query: 256 VLG 264
             G
Sbjct: 804 KYG 806



 Score = 31.1 bits (67), Expect = 0.94
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 444 PDGLHLLTLEPRGDD-LLLLIENY 512
           P  +HLLTLEP  DD +LL +EN+
Sbjct: 865 PKSVHLLTLEPFNDDEILLRVENF 888


>AE014134-1562|AAF52710.1|  982|Drosophila melanogaster CG9466-PA
           protein.
          Length = 982

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 32/63 (50%), Positives = 47/63 (74%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYP+ + I +++ ++R  +L DRA GG S+ +G+I+LM+HRRL+ DD +GVGEALNE 
Sbjct: 744 GNYYPITSRIALQDSNKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEE 803

Query: 256 VLG 264
             G
Sbjct: 804 KYG 806



 Score = 31.1 bits (67), Expect = 0.94
 Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +3

Query: 444 PDGLHLLTLEPRGDD-LLLLIENY 512
           P  +HLLTLEP  DD +LL +EN+
Sbjct: 865 PKSVHLLTLEPFNDDEILLRVENF 888


>AY119107-1|AAM50967.1| 1007|Drosophila melanogaster RE08556p
           protein.
          Length = 1007

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = +1

Query: 82  YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNETVL 261
           YYPV + I +++  +R  VL DRA GGAS++ G+++LM+HRRL+ DD +GVGEALNE   
Sbjct: 771 YYPVTSRIALQDSKKRIAVLNDRAQGGASMLNGQLELMLHRRLVRDDGYGVGEALNEEKY 830

Query: 262 G 264
           G
Sbjct: 831 G 831



 Score = 32.3 bits (70), Expect = 0.41
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +3

Query: 444 PDGLHLLTLEPRGDD-LLLLIENYL 515
           P  +HLLTLEP  DD +LL +EN+L
Sbjct: 890 PKSVHLLTLEPFNDDEVLLRVENFL 914


>AE014134-1563|AAF52711.2| 1007|Drosophila melanogaster CG9468-PA
           protein.
          Length = 1007

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = +1

Query: 82  YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNETVL 261
           YYPV + I +++  +R  VL DRA GGAS++ G+++LM+HRRL+ DD +GVGEALNE   
Sbjct: 771 YYPVTSRIALQDSKKRIAVLNDRAQGGASMLNGQLELMLHRRLVRDDGYGVGEALNEEKY 830

Query: 262 G 264
           G
Sbjct: 831 G 831



 Score = 32.3 bits (70), Expect = 0.41
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +3

Query: 444 PDGLHLLTLEPRGDD-LLLLIENYL 515
           P  +HLLTLEP  DD +LL +EN+L
Sbjct: 890 PKSVHLLTLEPFNDDEVLLRVENFL 914


>AE014134-1561|AAF52709.1|  942|Drosophila melanogaster CG9465-PA
           protein.
          Length = 942

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 31/63 (49%), Positives = 46/63 (73%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G +YPV + I +++D +R  +L DR+ GGASL +G +++++HRR L +D  GVGEALNET
Sbjct: 703 GNFYPVTSRIALQDDTKRLVLLNDRSQGGASLEDGALEMLIHRRHLFNDGGGVGEALNET 762

Query: 256 VLG 264
             G
Sbjct: 763 QYG 765


>AE014134-1560|AAF52708.2| 1003|Drosophila melanogaster CG9463-PA
           protein.
          Length = 1003

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YYPV + + +++  +R  +L DR+ GGASL +G +++M+HRR +  D  G  EA+NE 
Sbjct: 764 GNYYPVTSRMALQDSSKRMVLLNDRSQGGASLEDGRLEMMLHRRHIFADGSGAAEAINEQ 823

Query: 256 VLG 264
             G
Sbjct: 824 QFG 826



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
 Frame = +3

Query: 378  KEIILENWL---QMNNYQTFASKTL------PDGLHLLTLEPRG-DDLLLLIENYL 515
            KEI L  W    + NN Q+  +KTL      P  +HLLTLEP   D++LL +EN+L
Sbjct: 855  KEIHLPFWKFFSKSNNIQSDVTKTLSDFNDLPQSVHLLTLEPYSKDEILLRLENFL 910


>AY071249-1|AAL48871.2| 1016|Drosophila melanogaster RE28991p
           protein.
          Length = 1016

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = +1

Query: 76  GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
           G YY V + + +++  +R  +L DR+ GGASL +G +++M+HRR +  D  G  EA+NE 
Sbjct: 777 GNYYQVTSRVALQDSSKRMVLLNDRSQGGASLEDGRLEMMLHRRHIFADGSGAAEAINEQ 836

Query: 256 VLG 264
             G
Sbjct: 837 QFG 839



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
 Frame = +3

Query: 378  KEIILENWL---QMNNYQTFASKTL------PDGLHLLTLEPRG-DDLLLLIENYL 515
            KEI L  W    + NN Q+  +KTL      P  +HLLTLEP   D++LL +EN+L
Sbjct: 868  KEIHLPFWKFFSKSNNIQSDVTKTLSDFNDLPQSVHLLTLEPYSKDEILLRLENFL 923


>X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi
            alpha-mannosidaseII protein.
          Length = 1108

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +1

Query: 82   YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEAL--NET 255
            YYP+ + ++IE+ + R T+LT +  GG+SL  GE+++M  RRL  DD  G+G+ +  N+ 
Sbjct: 891  YYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKP 950

Query: 256  VL 261
            VL
Sbjct: 951  VL 952


>AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p protein.
          Length = 1108

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +1

Query: 82   YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEAL--NET 255
            YYP+ + ++IE+ + R T+LT +  GG+SL  GE+++M  RRL  DD  G+G+ +  N+ 
Sbjct: 891  YYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKP 950

Query: 256  VL 261
            VL
Sbjct: 951  VL 952


>AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster alpha-mannosidase
            II protein.
          Length = 1108

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +1

Query: 82   YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEAL--NET 255
            YYP+ + ++IE+ + R T+LT +  GG+SL  GE+++M  RRL  DD  G+G+ +  N+ 
Sbjct: 891  YYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKP 950

Query: 256  VL 261
            VL
Sbjct: 951  VL 952


>AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA
            protein.
          Length = 1108

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = +1

Query: 82   YYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEAL--NET 255
            YYP+ + ++IE+ + R T+LT +  GG+SL  GE+++M  RRL  DD  G+G+ +  N+ 
Sbjct: 891  YYPIPSGMFIEDANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDNKP 950

Query: 256  VL 261
            VL
Sbjct: 951  VL 952


>AE014297-2087|AAF55228.2| 1249|Drosophila melanogaster CG4606-PA
            protein.
          Length = 1249

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/62 (37%), Positives = 40/62 (64%)
 Frame = +1

Query: 76   GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
            G Y+P+ +  +I++   R T+LT  A G AS   G++++M+ RR L+DD  G+GE + ++
Sbjct: 1004 GNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDS 1063

Query: 256  VL 261
             L
Sbjct: 1064 RL 1065


>AB120954-1|BAC92711.1| 1249|Drosophila melanogaster alpha-mannosidase
            protein.
          Length = 1249

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/62 (37%), Positives = 40/62 (64%)
 Frame = +1

Query: 76   GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
            G Y+P+ +  +I++   R T+LT  A G AS   G++++M+ RR L+DD  G+GE + ++
Sbjct: 1004 GNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDS 1063

Query: 256  VL 261
             L
Sbjct: 1064 RL 1065


>AB018079-1|BAA75817.1| 1249|Drosophila melanogaster alpha-mannosidase
            protein.
          Length = 1249

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/62 (37%), Positives = 40/62 (64%)
 Frame = +1

Query: 76   GEYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNET 255
            G Y+P+ +  +I++   R T+LT  A G AS   G++++M+ RR L+DD  G+GE + ++
Sbjct: 1004 GNYFPITSGAFIQDSRLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDS 1063

Query: 256  VL 261
             L
Sbjct: 1064 RL 1065


>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
            protein.
          Length = 1998

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 266  LPSTVSFNASPT-PNASSWSNLLCTISWISPSTKDAPPAARSVN 138
            L  T SFNA P  P +SS S+LL  +S  S S+  +PP   + +
Sbjct: 1610 LTPTTSFNALPHFPLSSSTSSLLSKVSSFSNSSSASPPTTAATS 1653


>AY089435-1|AAL90173.1|  400|Drosophila melanogaster AT25434p
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 127 FDRHSQYIFH*QLDNIPRNGFFQDIPLRSFIKDPLN 20
           FD   QY F+  LDN+    F   +P    I+D LN
Sbjct: 303 FDNMVQYYFYYLLDNLKALNFGGSLPQLQHIRDALN 338


>AE014297-3779|AAN14049.1|  400|Drosophila melanogaster CG31099-PA
           protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 127 FDRHSQYIFH*QLDNIPRNGFFQDIPLRSFIKDPLN 20
           FD   QY F+  LDN+    F   +P    I+D LN
Sbjct: 303 FDNMVQYYFYHLLDNLKALNFGGSLPQLQHIRDALN 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,514,037
Number of Sequences: 53049
Number of extensions: 427240
Number of successful extensions: 1133
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -