Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M09
(223 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical po... 26 4.2
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 26 4.2
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 26 4.2
Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical pr... 26 4.2
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 26 4.2
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 26 4.2
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 26 4.2
U88175-5|AAB42278.2| 350|Caenorhabditis elegans Hypothetical pr... 25 5.5
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 25 5.5
U61954-11|AAL08035.1| 238|Caenorhabditis elegans Hypothetical p... 25 9.6
>Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical
polypeptide III protein.
Length = 523
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 345 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 389
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 501 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 545
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 676 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 720
>Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical
protein.
Length = 523
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 345 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 389
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 501 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 545
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 676 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 720
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 19 GLMNSARVYFIFAMRKLYLLLSLPKKGPVIVGDDKKLIILGYSGR 153
G +++ R + + + PKKG + VG D L+I SG+
Sbjct: 676 GRIDAMRFVAVTSTNAAKMFNMYPKKGRIAVGADADLVIWDASGK 720
>U88175-5|AAB42278.2| 350|Caenorhabditis elegans Hypothetical
protein F21F3.1 protein.
Length = 350
Score = 25.4 bits (53), Expect = 5.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 24 DEFGEGLFHFRHAKTI 71
DEFG GLF+ H TI
Sbjct: 117 DEFGAGLFYMPHGLTI 132
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +3
Query: 147 RTGQEKRSFPPPD-----EYVTWPVFRWS 218
RTG+ K++F + + TWP FRWS
Sbjct: 284 RTGELKKAFSTFELTGRTQLPTWPFFRWS 312
>U61954-11|AAL08035.1| 238|Caenorhabditis elegans Hypothetical
protein F41H10.12 protein.
Length = 238
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 152 RPEYPKIINFLSSPTITGPFFGRESNKYSFRM 57
R + KI F SSP T F E YS+++
Sbjct: 161 REDIKKIATFDSSPEATENSFSVEEEDYSYKL 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,837,435
Number of Sequences: 27780
Number of extensions: 107983
Number of successful extensions: 205
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,740,198
effective HSP length: 53
effective length of database: 11,267,858
effective search space used: 225357160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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