Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M07
(357 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 193 6e-51
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 26 1.5
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 25 2.6
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 4.6
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 24 6.1
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 24 6.1
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 24 6.1
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 24 8.0
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 8.0
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 24 8.0
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 24 8.0
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 193 bits (471), Expect = 6e-51
Identities = 88/111 (79%), Positives = 99/111 (89%)
Frame = +2
Query: 11 EDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPR 190
E EELNKTKPIWTRN ++T+EEY FYKSLTND EDHLAVKHFSVEGQLEFRA+LFVPR
Sbjct: 261 ETEELNKTKPIWTRNPSEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFRAILFVPR 320
Query: 191 RAPFDLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
RAP DLFE +++NNIKLYVR VFI D+CE+LIPE+L FI+GVVDSEDLPL
Sbjct: 321 RAPMDLFEAKRKKNNIKLYVRRVFITDDCEELIPEWLGFIKGVVDSEDLPL 371
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 26.2 bits (55), Expect = 1.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 179 RVKHGIPTDLLRRSVLQQDDPRSH 108
R HGIP DLL R ++ P SH
Sbjct: 335 RSPHGIPVDLLDRMLIISTLPYSH 358
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.4 bits (53), Expect = 2.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 170 HGIPTDLLRRSVLQQDDPRSHWSEI 96
HGIPTDLL R ++ + P S SEI
Sbjct: 349 HGIPTDLLDRLLIVRTLPYSE-SEI 372
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 24.6 bits (51), Expect = 4.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 215 FQIDQMEPCEVQRVKHG 165
F+I Q+ C+V R+KHG
Sbjct: 464 FKISQVLGCDVYRLKHG 480
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 24.2 bits (50), Expect = 6.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 224 RQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLP 340
+Q+NI YV+ ++ + C+ +I + I+ V DS +P
Sbjct: 1724 KQDNILYYVKLFYLSEICKTII----SMIKVVADSSVVP 1758
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 24.2 bits (50), Expect = 6.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 183 YLAGLHLIYLKIKNARTTLNFM 248
YL GLH +Y K K LN++
Sbjct: 97 YLLGLHRVYKKKKGKIEELNYL 118
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.2 bits (50), Expect = 6.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 322 DYTPDEVQVFWDKVFTVVHDKYRSDIKFNVVL 227
DY+PD+++ +K +D + S I N L
Sbjct: 780 DYSPDKIKEIKEKELNTYNDYFNSAISENPTL 811
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 23.8 bits (49), Expect = 8.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 313 PDEVQVFWDKVFTVVHDKYR 254
P E FWDK+ V H + R
Sbjct: 1275 PSEKLGFWDKIRLVAHSQIR 1294
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 23.8 bits (49), Expect = 8.0
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 183 TKSKARNSN*PSTEKCFTAR*SSQSLVRDL*KSPYSSCVMSSAFLVQIGLVLFNSSSSAS 4
T + +S+ P + FT+ +S S + L S SSA L SSSSAS
Sbjct: 55 TAISSSSSSSPLSSSSFTSP-ASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSAS 113
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 23.8 bits (49), Expect = 8.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 224 VFNFQIDQMEPCEVQRVKHGIPTDLL 147
+++ ++ ++ ++Q V GIPTDLL
Sbjct: 314 IYDTKLLYLKSDDLQHVSDGIPTDLL 339
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 23.8 bits (49), Expect = 8.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 80 YGDFYKSLTNDCEDHLAVKHFSVEGQLEFRA 172
+GD Y + + D LAVK ++ FR+
Sbjct: 1048 FGDVYTGVNMETGDLLAVKEIKLQDSRTFRS 1078
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,445,498
Number of Sequences: 5004
Number of extensions: 27425
Number of successful extensions: 84
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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