Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M07
(357 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 185 1e-47
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 185 1e-47
04_01_0042 + 473912-474058,474208-474349,474442-476264 184 1e-47
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 181 1e-46
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 169 4e-43
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 119 6e-28
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 114 2e-26
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 111 2e-25
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 109 6e-25
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 109 8e-25
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 31 0.20
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 31 0.27
04_04_0448 - 25314042-25314183,25314271-25314321,25314437-253150... 27 4.3
07_03_1726 - 29062654-29064414 27 5.7
07_01_1094 + 10050988-10051177,10052128-10052591 27 5.7
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 27 5.7
11_05_0045 - 18577329-18578338,18578704-18578917 26 7.6
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 185 bits (450), Expect = 1e-47
Identities = 81/107 (75%), Positives = 97/107 (90%)
Frame = +2
Query: 23 LNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRAPF 202
+NK KPIW R ++IT+EEY FYKSLTND E+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 203 DLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
DLF+ K+QNNIKLYVR VFIMDNCE+LIPE+L+F++G+VDSEDLPL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPL 369
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 185 bits (450), Expect = 1e-47
Identities = 81/107 (75%), Positives = 97/107 (90%)
Frame = +2
Query: 23 LNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRAPF 202
+NK KPIW R ++IT+EEY FYKSLTND E+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 203 DLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
DLF+ K+QNNIKLYVR VFIMDNCE+LIPE+L+F++G+VDSEDLPL
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPL 369
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 184 bits (449), Expect = 1e-47
Identities = 81/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 20 ELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRAP 199
++NK KPIW R ++I++EEY FYKSLTND EDHLAVKHFSVEGQLEF+A+LFVPRRAP
Sbjct: 267 QINKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAP 326
Query: 200 FDLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
FDLF+ K+ NNIKLYVR VFIMDNCE+LIPE+L F++GVVDS+DLPL
Sbjct: 327 FDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWLGFVKGVVDSDDLPL 374
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 181 bits (441), Expect = 1e-46
Identities = 80/107 (74%), Positives = 96/107 (89%)
Frame = +2
Query: 23 LNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRAPF 202
+NK KPIW R ++IT+EEY FYKSLTND E+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPF 322
Query: 203 DLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
DLF+ K+ NNIKLYVR VFIMDNCE+LIPE+L+F++G+VDSEDLPL
Sbjct: 323 DLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPL 369
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 169 bits (412), Expect = 4e-43
Identities = 75/98 (76%), Positives = 90/98 (91%)
Frame = +2
Query: 50 RNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFEN*KRQ 229
R ++IT+EEY FYKSLTND E+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ K+Q
Sbjct: 18 RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQ 77
Query: 230 NNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
NNIKLYVR VFIMDNCE+LIPE+L+F++G+VDSEDLPL
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPL 115
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 119 bits (287), Expect = 6e-28
Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 4/115 (3%)
Frame = +2
Query: 11 EDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDH--LAVKHFSVEGQLEFRALLFV 184
E E LN K IW R+ ++T+EEY FY SL D D L+ HF+ EG +EF+ALLFV
Sbjct: 365 EWELLNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFV 424
Query: 185 PRRAPFDLFEN*KRQN--NIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
P +AP DL+E+ N N+KLYVR VFI D ++L+P+YL+F++G+VDS+ LPL
Sbjct: 425 PPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPL 479
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 114 bits (274), Expect = 2e-26
Identities = 53/110 (48%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRA 196
E N+T+PIW RN +++ EEY +FYK N+ D LA HF+ EG++EFR++L+VP
Sbjct: 607 ELTNETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEVEFRSILYVPATK 666
Query: 197 PFDLFEN*KRQNNIKLYVRTVFIMDNCE-DLIPEYLNFIRGVVDSEDLPL 343
D+ + ++ NI+LYV+ VFI D+ + +L P YL+F+RGVVDS DLPL
Sbjct: 667 KEDITD--RKTKNIRLYVKRVFISDDFDGELFPRYLSFVRGVVDSNDLPL 714
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 111 bits (266), Expect = 2e-25
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRA 196
E N+TKPIW RN ++ + EY +FYK N+ D LA HF+ EG++EFR++L++P A
Sbjct: 344 ELANETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMA 403
Query: 197 PFDLFE-N*KRQNNIKLYVRTVFIMDNCE-DLIPEYLNFIRGVVDSEDLPL 343
P E + NI+LYV+ VFI D+ + +L P YL+F++GVVDS DLPL
Sbjct: 404 PLSNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPL 454
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 109 bits (262), Expect = 6e-25
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRA 196
E N+TKPIW R+ +I + EY +FYK N+ D LA HF+ EG++EFR++L++P A
Sbjct: 594 ELANETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMA 653
Query: 197 PFDLFE-N*KRQNNIKLYVRTVFIMDNCE-DLIPEYLNFIRGVVDSEDLPL 343
P E + NI+LYV+ VFI D+ + +L P YL+F++GVVDS DLPL
Sbjct: 654 PLSNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPL 704
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 109 bits (261), Expect = 8e-25
Identities = 48/65 (73%), Positives = 58/65 (89%)
Frame = +2
Query: 149 EGQLEFRALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDS 328
EGQLEF+A+LFVP+ APFD+F+ K+ NNIKLYVR VFIMDNCE+LIPE+L+F+ GVVD
Sbjct: 553 EGQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVEGVVDY 612
Query: 329 EDLPL 343
EDLPL
Sbjct: 613 EDLPL 617
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 31.5 bits (68), Expect = 0.20
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 44 WTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFS 145
W NAD +T+ EYG + SL N+ + A+ H S
Sbjct: 237 WNPNADTMTRNEYGVWEISLPNNADGSPAIPHGS 270
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 31.1 bits (67), Expect = 0.27
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 206 DQMEPC-EVQRVKHGIPTDLLRRSVLQQDDPRSHWSEICRNL 84
D E C E+ R G+P ++ S L + PR WSE+ R++
Sbjct: 357 DLEEVCDEILRKCEGVPLAIVTTSSLLESKPREDWSELYRSI 398
>04_04_0448 -
25314042-25314183,25314271-25314321,25314437-25315033,
25315151-25315353
Length = 330
Score = 27.1 bits (57), Expect = 4.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -1
Query: 204 SNGALRGTKSKARNSN*PSTEKCFTAR*SSQSLVRDL*KSPYSSCVM--SSAFLVQIGL 34
S+GA RG + A N PST +S + +R SP+ S M AF+ GL
Sbjct: 42 SSGACRGVRCSAANKPSPSTAPGTEVSSTSMAKIRSEVLSPFRSVRMFFYLAFMASAGL 100
>07_03_1726 - 29062654-29064414
Length = 586
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -2
Query: 227 GVFNFQIDQMEPCEVQRVKHGIPTDLLRRSVLQQDDPRSHWSEICRNLRTPP 72
G+ + + ME C Q +GI + + D+ RS W E R R P
Sbjct: 132 GILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGP 183
>07_01_1094 + 10050988-10051177,10052128-10052591
Length = 217
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 65 ITQEEYGDFYKSLTNDCEDHL 127
+TQEE+ DFY +TN DHL
Sbjct: 35 VTQEEFPDFYFRVTN--SDHL 53
>04_04_1457 -
33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 26.6 bits (56), Expect = 5.7
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 2 HEAEDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVE 151
H A+ + NKT D+I + YG YK L + D +A+K S+E
Sbjct: 6 HNAQFHK-NKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
>11_05_0045 - 18577329-18578338,18578704-18578917
Length = 407
Score = 26.2 bits (55), Expect = 7.6
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 41 IWTRN-ADDITQEEYGDFYKSLTNDCEDHLA 130
I T N A +TQEEY D+Y +TN +HLA
Sbjct: 34 IGTANPASWVTQEEYVDWYFRVTN--SEHLA 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,176,772
Number of Sequences: 37544
Number of extensions: 169305
Number of successful extensions: 494
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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