Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M07
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 206 3e-54
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 132 5e-32
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 65 2e-11
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 65 2e-11
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z92827-9|CAB54200.1| 510|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z92827-8|CAB07330.1| 527|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z54269-6|CAB54208.1| 510|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z54269-5|CAA91023.1| 527|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 5.1
U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van gogh/... 27 5.1
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 5.1
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 26 6.7
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 26 6.7
AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical ... 26 6.7
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 26 6.7
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 26 8.9
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 26 8.9
AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical ... 26 8.9
AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p4... 26 8.9
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 206 bits (504), Expect = 3e-54
Identities = 94/111 (84%), Positives = 104/111 (93%)
Frame = +2
Query: 11 EDEELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPR 190
EDEELNKTKPIWTRN DDI+ EEY +FYKSL+ND EDHLAVKHFSVEGQLEFRALLFVP+
Sbjct: 257 EDEELNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQ 316
Query: 191 RAPFDLFEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
RAPFDLFEN K +N+IKLYVR VFIM+NCE+L+PEYLNFI+GVVDSEDLPL
Sbjct: 317 RAPFDLFENKKSKNSIKLYVRRVFIMENCEELMPEYLNFIKGVVDSEDLPL 367
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 132 bits (320), Expect = 5e-32
Identities = 58/110 (52%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEFRALLFVPRRA 196
E++N KPIW R + + ++EY FYKS+T D E+ L+ HFS EG++ FR++L+VP+++
Sbjct: 313 EKVNNVKPIWMRKPNQVEEDEYKQFYKSITKDSEEPLSHVHFSAEGEVSFRSILYVPKKS 372
Query: 197 PFDLFEN-*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
P D+F+N K NIKLYVR VFI D+ D++P+YL+FIRG+VDS+DLPL
Sbjct: 373 PNDMFQNYGKVIENIKLYVRRVFITDDFADMLPKYLSFIRGIVDSDDLPL 422
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 64.9 bits (151), Expect = 2e-11
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTN-DCEDHLAVK-----HFSVEGQLEFRALL 178
E +N IWT A ++ +E + F+K L + + + HF + + R+++
Sbjct: 246 ERVNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVI 305
Query: 179 FVPRRAPFDL-FEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
++P+ L F + + LY R V I + ++LIP YL F+ GVVDSED+PL
Sbjct: 306 YIPQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSEDIPL 361
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 64.9 bits (151), Expect = 2e-11
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Frame = +2
Query: 17 EELNKTKPIWTRNADDITQEEYGDFYKSLTN-DCEDHLAVK-----HFSVEGQLEFRALL 178
E +N IWT A ++ +E + F+K L + + + HF + + R+++
Sbjct: 246 ERVNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVI 305
Query: 179 FVPRRAPFDL-FEN*KRQNNIKLYVRTVFIMDNCEDLIPEYLNFIRGVVDSEDLPL 343
++P+ L F + + LY R V I + ++LIP YL F+ GVVDSED+PL
Sbjct: 306 YIPQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYLRFVIGVVDSEDIPL 361
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 2 HEAEDEELNKTKPIWTRNADD---ITQEEYGDFYK-SLTNDCEDHL 127
+E EDEE + WT DD IT EE + Y S T +DH+
Sbjct: 629 YEEEDEEEEYSSGDWTEGEDDEEYITDEEEDNEYSVSQTFSLKDHI 674
>Z92827-9|CAB54200.1| 510|Caenorhabditis elegans Hypothetical
protein F02C12.5c protein.
Length = 510
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 5 EAEDEELNKTKPIWTRNADDITQEEY 82
EA+ L+++K IW NADD E +
Sbjct: 410 EADVMSLHRSKEIWGENADDFVPERW 435
>Z92827-8|CAB07330.1| 527|Caenorhabditis elegans Hypothetical
protein F02C12.5a protein.
Length = 527
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 5 EAEDEELNKTKPIWTRNADDITQEEY 82
EA+ L+++K IW NADD E +
Sbjct: 410 EADVMSLHRSKEIWGENADDFVPERW 435
>Z54269-6|CAB54208.1| 510|Caenorhabditis elegans Hypothetical
protein F02C12.5c protein.
Length = 510
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 5 EAEDEELNKTKPIWTRNADDITQEEY 82
EA+ L+++K IW NADD E +
Sbjct: 410 EADVMSLHRSKEIWGENADDFVPERW 435
>Z54269-5|CAA91023.1| 527|Caenorhabditis elegans Hypothetical
protein F02C12.5a protein.
Length = 527
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 5 EAEDEELNKTKPIWTRNADDITQEEY 82
EA+ L+++K IW NADD E +
Sbjct: 410 EADVMSLHRSKEIWGENADDFVPERW 435
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 164 IPTDLLRRSVLQQDDPRSHWSEICRNLRTPPV*CHR 57
IP +LL+ + Q + H+S+ RNL P+ C R
Sbjct: 117 IPVELLKTKLQVQRENIGHFSKHSRNLYAGPLECAR 152
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 167 RALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMD 271
RAL +PR P L N K + ++ TV + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 167 RALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMD 271
RAL +PR P L N K + ++ TV + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 167 RALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMD 271
RAL +PR P L N K + ++ TV + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 167 RALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMD 271
RAL +PR P L N K + ++ TV + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van
gogh/strabismus planarpolarity protein) homolog protein
1, isoform b protein.
Length = 529
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 169 TEFQLTFYGEVFYSKMILAVIGQRFV-EISVLLLCDVIGVSSPDRFSL 29
T T +V Y+ I VIG+RFV ++ LLC + VS+P SL
Sbjct: 74 TTDSFTMEEKVIYTPPIGRVIGRRFVWLLASSLLCIISVVSAPIMCSL 121
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 167 RALLFVPRRAPFDLFEN*KRQNNIKLYVRTVFIMD 271
RAL +PR P L N K + ++ TV + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 KTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAV-KHFSVEGQL 160
KT P+ ++ D ++QEE ++L D + L H ++GQ+
Sbjct: 262 KTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQGHHLKLKGQM 306
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 KTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAV-KHFSVEGQL 160
KT P+ ++ D ++QEE ++L D + L H ++GQ+
Sbjct: 300 KTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQGHHLKLKGQM 344
>AL032655-4|CAB63413.2| 485|Caenorhabditis elegans Hypothetical
protein Y6B3B.9 protein.
Length = 485
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 313 PDEVQVFWDKVFTVVHDKYRSDIKFNVVLAFL 218
P+E+Q FW+ +F H + + +V+AFL
Sbjct: 274 PEEIQAFWEPLF---HVMFSLKLGAEIVVAFL 302
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 29 KTKPIWTRNADDITQEEYGDFYKSLTNDCEDHLAV-KHFSVEGQL 160
KT P+ ++ D ++QEE ++L D + L H ++GQ+
Sbjct: 300 KTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQGHHLKLKGQM 344
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 59 DDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLE 163
D I + YG YK++ N + +A+K +E + E
Sbjct: 315 DQIGEGTYGQVYKAVNNLTGEQVALKRVRLENEKE 349
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 62 DITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQL 160
D EEY DFY +T+ +D V +VE L
Sbjct: 1402 DEYMEEYMDFYDKITHLMKDEPCVPEINVEDVL 1434
>AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical
protein C11D9.1 protein.
Length = 569
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 171 LYSLYLAGLHLIYLKIKNARTTL------NFMSERYLSW 269
+Y+ Y AG HL+ +IKN + L N E++ SW
Sbjct: 307 IYAEYAAGYHLLQHEIKNKKELLSKLEAVNSTREQHCSW 345
>AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p450
family protein33C12 protein.
Length = 426
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 50 RNADDITQEEYGDFYKSLTNDCEDHLAVKHFSVEGQLEF 166
++ +D+ E DFYK + E+H + F E L++
Sbjct: 228 KSVEDLLAEFTVDFYKFFNHQIEEHRSKIDFDSEESLDY 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,998,841
Number of Sequences: 27780
Number of extensions: 154828
Number of successful extensions: 423
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -