Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M06
(206 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer... 29 2.1
L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. 29 2.1
DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast canc... 29 2.1
DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early o... 29 2.1
BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein. 29 2.1
AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian canc... 29 2.1
AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein. 29 2.1
AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian canc... 29 2.1
AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early ... 29 2.1
AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian canc... 29 2.1
BC021704-1|AAH21704.1| 350|Homo sapiens MORN1 protein protein. 29 2.7
AL589739-1|CAI22504.1| 497|Homo sapiens novel protein protein. 29 2.7
AL513477-7|CAI22609.1| 350|Homo sapiens novel protein protein. 29 2.7
AL513477-6|CAI22608.1| 497|Homo sapiens novel protein protein. 29 2.7
AK024003-1|BAB14768.1| 497|Homo sapiens protein ( Homo sapiens ... 29 2.7
>U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer
susceptibility protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast cancer 1
protein.
Length = 1822
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early onset
protein.
Length = 1822
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>BC115037-1|AAI15038.1| 1354|Homo sapiens BRCA1 protein protein.
Length = 1354
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 415 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 464
>AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian cancer
susceptibility protein protein.
Length = 1841
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein.
Length = 1399
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>AY304547-1|AAP70031.1| 1141|Homo sapiens breast and ovarian cancer
susceptibility protein protein.
Length = 1141
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 721 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 770
>AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early onset
protein.
Length = 1863
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 945 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 994
>AF005068-1|AAB61673.1| 1792|Homo sapiens breast and ovarian cancer
susceptibility protein splice variant protein.
Length = 1792
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 SVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKI-RLNSVQSFAGRRC 202
S+ G+R S F +GLITPN L+ + Y+I L ++SF +C
Sbjct: 874 SIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKC 923
>BC021704-1|AAH21704.1| 350|Homo sapiens MORN1 protein protein.
Length = 350
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 197 DAPRKTELSLSGFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAPMY 51
D PR+ + G Y YP F Y G AG+K GK LF Y
Sbjct: 17 DPPRRPPRNGYGVYVYPNSFFRYEG---EWKAGRKHGHGKLLFKDGSYY 62
>AL589739-1|CAI22504.1| 497|Homo sapiens novel protein protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 197 DAPRKTELSLSGFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAPMY 51
D PR+ + G Y YP F Y G AG+K GK LF Y
Sbjct: 17 DPPRRPPRNGYGVYVYPNSFFRYEG---EWKAGRKHGHGKLLFKDGSYY 62
>AL513477-7|CAI22609.1| 350|Homo sapiens novel protein protein.
Length = 350
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 197 DAPRKTELSLSGFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAPMY 51
D PR+ + G Y YP F Y G AG+K GK LF Y
Sbjct: 17 DPPRRPPRNGYGVYVYPNSFFRYEG---EWKAGRKHGHGKLLFKDGSYY 62
>AL513477-6|CAI22608.1| 497|Homo sapiens novel protein protein.
Length = 497
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 197 DAPRKTELSLSGFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAPMY 51
D PR+ + G Y YP F Y G AG+K GK LF Y
Sbjct: 17 DPPRRPPRNGYGVYVYPNSFFRYEG---EWKAGRKHGHGKLLFKDGSYY 62
>AK024003-1|BAB14768.1| 497|Homo sapiens protein ( Homo sapiens
cDNA FLJ13941 fis, clone Y79AA1000850. ).
Length = 497
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = -1
Query: 197 DAPRKTELSLSGFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAPMY 51
D PR+ + G Y YP F Y G AG+K GK LF Y
Sbjct: 17 DPPRRPPRNGYGVYVYPNSFFRYEG---EWKAGRKHGHGKLLFKDGSYY 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,488,694
Number of Sequences: 237096
Number of extensions: 750880
Number of successful extensions: 5303
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5303
length of database: 76,859,062
effective HSP length: 47
effective length of database: 65,715,550
effective search space used: 1380026550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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