Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M06
(206 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 29 0.60
AF067942-10|AAG45578.2| 358|Caenorhabditis elegans Hypothetical... 28 0.79
AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical ... 27 1.4
Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 26 3.2
AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a prot... 26 3.2
U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or aq... 26 4.2
U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or aq... 26 4.2
U37429-13|AAA79343.1| 303|Caenorhabditis elegans Hypothetical p... 25 5.6
AL032652-9|CAB76748.1| 267|Caenorhabditis elegans Hypothetical ... 25 5.6
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 25 9.7
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 25 9.7
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 25 9.7
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 25 9.7
AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome r... 25 9.7
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 25 9.7
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 25 9.7
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 25 9.7
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 25 9.7
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 25 9.7
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 25 9.7
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 203 NTDAPRKTELSLSGFYKYPKQGFHYWGLSN 114
+ D P+ + +++ F+ P +G H WGL N
Sbjct: 126 DNDEPKFSNVNVGEFHAKPPKGGHSWGLRN 155
>AF067942-10|AAG45578.2| 358|Caenorhabditis elegans Hypothetical
protein ZK6.1 protein.
Length = 358
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 122 LSNRTMAGKKCFGGKFLFHPAPMYTR 45
L RTM KKCF G++ F +P YTR
Sbjct: 35 LITRTMPIKKCFLGEYCFERSP-YTR 59
>AL032637-6|CAA21620.2| 422|Caenorhabditis elegans Hypothetical
protein Y43F8C.6 protein.
Length = 422
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 1 TLLQRAPPFGKLPVVRVYIGAGWNKNLPPKHFL 99
TLL + PP LP I W K P F+
Sbjct: 388 TLLHQGPPIKDLPPASSLIPTSWRKKSPETEFV 420
>Z80215-8|CAB02275.1| 381|Caenorhabditis elegans Hypothetical
protein C36B1.10 protein.
Length = 381
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 8 YNA---LLRLENYQLCGCTSVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTY 157
YNA LL++ +Y SV ++YH + +Y P L+ N +DT+
Sbjct: 160 YNADTGLLKISDYGSSAIESVKTPQQSYHVTRYYRPPELLLGSKNYGCKIDTW 212
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 18 SSVWKITSCAGVHRCRMEQELTTE 89
S+ W + C + C E+E TTE
Sbjct: 670 SATWHTSKCIKIEECPPEEETTTE 693
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 18 SSVWKITSCAGVHRCRMEQELTTE 89
S+ W + C + C E+E TTE
Sbjct: 461 SATWHTSKCIKIEECPPEEETTTE 484
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 5 YYNALLRLENYQLCGCTSVPD 67
+ AL LENY L C+S+PD
Sbjct: 635 FEKALETLENYDLENCSSMPD 655
>AC006714-10|AAK29727.2| 253|Caenorhabditis elegans F-box a protein
protein 21 protein.
Length = 253
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +2
Query: 17 LLRLENYQLCGCTSVPDGTRTYHRSIFYPPLSGLITPNNGSLVLDTYKIRLNSVQSFAG 193
L+ +Q C + P+G R +F+P +G NN D+ R+ F G
Sbjct: 183 LMERSTFQKCTISEFPNGNRIEIVRVFWPEYNGNYHHNNFIHSFDSSSFRIICDHYFYG 241
>U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform b protein.
Length = 295
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 164 GFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAP 57
G Y Y + F+ + NRT+ G G F +P+P
Sbjct: 119 GMYSYYYEQFNAFDGGNRTILGATGTAGCFASYPSP 154
>U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform a protein.
Length = 304
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 164 GFYKYPKQGFHYWGLSNRTMAGKKCFGGKFLFHPAP 57
G Y Y + F+ + NRT+ G G F +P+P
Sbjct: 128 GMYSYYYEQFNAFDGGNRTILGATGTAGCFASYPSP 163
>U37429-13|AAA79343.1| 303|Caenorhabditis elegans Hypothetical
protein F09E5.3 protein.
Length = 303
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 145 NKASIIGGYQTGQWRVKNASVVSSCSIRHRCTPAQLVI 32
N S+ GG+ +GQ+ +K+ + S+ T +VI
Sbjct: 123 NITSVAGGFPSGQYHLKSKVLEVELSVADGATEIDIVI 160
>AL032652-9|CAB76748.1| 267|Caenorhabditis elegans Hypothetical
protein Y63D3A.11 protein.
Length = 267
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 205 VTPTPRERLN*V*ADFISIQNKASIIGGYQT 113
V+PTP + LN DFI I N +I G T
Sbjct: 34 VSPTPVKSLNMKVTDFILISNDEIVIFGRAT 64
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 119 ITPNNGSLVLDTYKIRLNSVQSFAGRRC 202
+TPN GSLV T+K + ++ C
Sbjct: 473 LTPNLGSLVFKTFKNHAKVMYKYSNSYC 500
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 197 PRPQDFNANGFHKWPFLSVQQWG 219
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF067219-13|AAC17024.1| 362|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 8 protein.
Length = 362
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 160 FISIQNKASIIGGYQTGQWRVKNASVVSSCSIRHRCTPAQLVIFQTEER 14
F + K I+G Y TG KN ++ ++ C LVI E +
Sbjct: 115 FYKVAAKEKIVGWYHTGPKLHKNDIAINE-QLKRFCPNPVLVIIDAEPK 162
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 191 PRKTELSLSGFYKYPKQGFHYWG 123
PR + + +GF+K+P WG
Sbjct: 570 PRPQDFNANGFHKWPFLSVQQWG 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,663,038
Number of Sequences: 27780
Number of extensions: 109602
Number of successful extensions: 282
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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