Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M04
         (390 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.3  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   1.3  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      22   6.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.1  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    22   9.1  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 250 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 369
           +LP  I P  L+ +      RR A+G  D P  ++ + SA
Sbjct: 455 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 494


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 250 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 369
           +LP  I P  L+ +      RR A+G  D P  ++ + SA
Sbjct: 456 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 495


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 368 ADLSSAVRAGASGLPTAPRRTVSVRTDLFRVAG 270
           ADL        SGLP   +RT++ +  +    G
Sbjct: 234 ADLVEQTSGSGSGLPLLVQRTIAKQIQMVHSVG 266


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 311 RTVSVRTDLFRVAGTISGG 255
           R V++  D+   +GT+SGG
Sbjct: 724 RVVTIGGDVIETSGTMSGG 742


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 283  SGLLVQFQEVSAGNLRYSY 227
            SGLL   +   AGN RY Y
Sbjct: 1888 SGLLTLKRTPDAGNTRYMY 1906


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 283  SGLLVQFQEVSAGNLRYSY 227
            SGLL   +   AGN RY Y
Sbjct: 1889 SGLLTLKRTPDAGNTRYMY 1907


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 55  PLQEGVMVAKKDYHAP 102
           P+   + VA KDYH P
Sbjct: 369 PVPVHLRVASKDYHVP 384


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,526
Number of Sequences: 2352
Number of extensions: 6686
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)