Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M04
(390 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 121 1e-27
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 121 1e-27
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 121 1e-27
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 121 1e-27
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 121 1e-27
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 121 1e-27
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 121 1e-27
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 121 1e-27
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 121 1e-27
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 118 5e-27
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 87 2e-17
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 78 1e-14
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 75 8e-14
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 70 2e-12
U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow... 29 5.3
M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow... 29 5.3
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 29 5.3
BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal d... 29 5.3
BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein. 29 5.3
AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal d... 29 5.3
AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens ... 29 5.3
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 121 bits (291), Expect = 1e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 76
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPATL+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 77 QYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 134
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 61 QFAWRHFYWYLTNE 74
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 118 bits (285), Expect = 5e-27
Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 10/119 (8%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 26 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 85
Query: 232 NTL-NFLHLPPEIVPATLKRSVRTETVR---RGAVG-RPDAPARTAEDRSAYRRA--PP 387
L ++LHLPPEIVPA L+RS R ET R +G G RP R DR YRR+ PP
Sbjct: 86 QYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPP 143
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 11 KMLMPKQNRVSIYEYLFRRESW*LRKTT---MHPNIQIXXXXXXXXXXXXCNHLNLEDML 181
+MLMPK+NR++IYE LF+ +K HP + + + +
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 182 RNSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 69 EQFAWRHFYWYLTNE 83
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 87.0 bits (206), Expect = 2e-17
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GM 231
+EGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH + G+
Sbjct: 10 KEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGI 69
Query: 232 NTL-NFLHL 255
L ++LHL
Sbjct: 70 QYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 77.8 bits (183), Expect = 1e-14
Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Frame = +1
Query: 52 VPLQEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF--NK 222
V +EGVMVAKKD HP + + NLQV++AM SL++RG V+E FAW H + N+
Sbjct: 18 VLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRETFAWCHFYWYLTNE 77
Query: 223 *GMNTLNFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAP 384
+ +LHLPPEIVPA+L+R R + A P A S +R P
Sbjct: 78 GIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTPHVQAVQGPLGSPPKRGP 131
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 8 AKMLMPKQNRVSIYEYLFRRESW*LRK----TTMHPNIQIXXXXXXXXXXXXCNHLNLED 175
A MLMP+ +IYE LFR +K ++HP++ L
Sbjct: 3 AGMLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVP---GVTNLQVMRAMASLRARG 59
Query: 176 MLRNS-SHGGIYWYLTNE 226
++R + + YWYLTNE
Sbjct: 60 LVRETFAWCHFYWYLTNE 77
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 74.9 bits (176), Expect = 8e-14
Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = +1
Query: 52 VPLQEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF--NK 222
V +EGVMVAKKD HP + + NLQV++AM SL++RG V+E FAW H + N+
Sbjct: 18 VLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRETFAWCHFFWYLTNE 77
Query: 223 *GMNTLNFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAP 384
+ +LHLPPEIV A+L+R R + A P A S +R P
Sbjct: 78 GIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTPHVQAVQGPLGSPPKRGP 131
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLV 213
+EGVMVAKKD H PKHP+L + PNL+V+KAMQSLKSRGYVKE LLV
Sbjct: 17 KEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKEVCLETFLLV 69
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFR 64
MLMPK+N ++IYE LF+
Sbjct: 1 MLMPKKNWIAIYELLFK 17
>U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 153 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLL 61
+S+DH + L +W+ GC LSY+ SL+
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLM 262
>M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 153 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLL 61
+S+DH + L +W+ GC LSY+ SL+
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLM 262
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPA 390
PP P+T +R + T +R A+G+P P TA SA +PPA
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPA 451
>BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 153 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLL 61
+S+DH + L +W+ GC LSY+ SL+
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLM 262
>BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein.
Length = 597
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPA 390
PP P+T +R + T +R A+G+P P TA SA +PPA
Sbjct: 23 PPVKAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPA 67
>AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 153 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLL 61
+S+DH + L +W+ GC LSY+ SL+
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLM 262
>AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens
cDNA FLJ33674 fis, clone BRAWH2002047. ).
Length = 667
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 256 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPA 390
PP P+T +R + T +R A+G+P P TA SA +PPA
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPA 451
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,770,409
Number of Sequences: 237096
Number of extensions: 1022376
Number of successful extensions: 2188
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2149
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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