Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M04
(390 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 144 4e-35
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 144 4e-35
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 144 4e-35
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 120 7e-28
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 120 7e-28
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro... 29 2.8
AJ537449-1|CAD61327.1| 234|Drosophila melanogaster osp-white ch... 29 2.8
AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA... 29 2.8
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB... 29 2.8
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA... 29 2.8
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 3.8
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 28 3.8
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 28 3.8
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 28 3.8
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 144 bits (349), Expect = 4e-35
Identities = 76/114 (66%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GMNT 237
+EGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQFAWRH + G+
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 238 L-NFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTAEDRSAYRRAP 384
L ++LHLPPEIVP+TLKR R+ETVR R AVG P P ++T EDRSAYRRAP
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAP 130
Score = 33.9 bits (74), Expect = 0.076
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRK---TTMHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
M MPK +RV+IYEYLF+ +K HP ++ + L +
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGL--VKE 58
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 59 QFAWRHYYWYLTNE 72
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 144 bits (349), Expect = 4e-35
Identities = 76/114 (66%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GMNT 237
+EGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQFAWRH + G+
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 238 L-NFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTAEDRSAYRRAP 384
L ++LHLPPEIVP+TLKR R+ETVR R AVG P P ++T EDRSAYRRAP
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAP 130
Score = 33.9 bits (74), Expect = 0.076
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRK---TTMHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
M MPK +RV+IYEYLF+ +K HP ++ + L +
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGL--VKE 58
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 59 QFAWRHYYWYLTNE 72
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 144 bits (349), Expect = 4e-35
Identities = 76/114 (66%), Positives = 88/114 (77%), Gaps = 6/114 (5%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLLVF-NK*GMNT 237
+EGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQFAWRH + G+
Sbjct: 17 KEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEGIEE 76
Query: 238 L-NFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTAEDRSAYRRAP 384
L ++LHLPPEIVP+TLKR R+ETVR R AVG P P ++T EDRSAYRRAP
Sbjct: 77 LRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTGEDRSAYRRAP 130
Score = 33.9 bits (74), Expect = 0.076
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFRRESW*LRK---TTMHPNIQIXXXXXXXXXXXXCNHLNLEDMLR 184
M MPK +RV+IYEYLF+ +K HP ++ + L +
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGL--VKE 58
Query: 185 NSSHGGIYWYLTNE 226
+ YWYLTNE
Sbjct: 59 QFAWRHYYWYLTNE 72
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 120 bits (289), Expect = 7e-28
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 8/118 (6%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHL--LVFNK*GMN 234
+EGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAWRH L+ N+ G+
Sbjct: 16 KEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNE-GIE 74
Query: 235 TL-NFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAEDRSAYRRAPPA 390
L +LHLPPEIVP+TL ++ R+ VR RG G P ++T +DRS YRR P A
Sbjct: 75 ELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGA 132
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 20 MPKQNRVSIYEYLFR 64
+PK NRV+IYEYLF+
Sbjct: 2 IPKANRVAIYEYLFK 16
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 120 bits (289), Expect = 7e-28
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 8/118 (6%)
Frame = +1
Query: 61 QEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHL--LVFNK*GMN 234
+EGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAWRH L+ N+ G+
Sbjct: 17 KEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNE-GIE 75
Query: 235 TL-NFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAEDRSAYRRAPPA 390
L +LHLPPEIVP+TL ++ R+ VR RG G P ++T +DRS YRR P A
Sbjct: 76 ELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDDDRSNYRRGPGA 133
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 14 MLMPKQNRVSIYEYLFR 64
M +PK NRV+IYEYLF+
Sbjct: 1 MFIPKANRVAIYEYLFK 17
>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
protein.
Length = 1374
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 329 LPTAPRRTVSVRTDLFRVAGTISGGKCRKFKVFIPHLLNTSKCLH 195
+P AP ++ AG + + + F P++ N SKC H
Sbjct: 10 VPAAPSKSAPPTPTTTGAAGATTNARTADCRKFTPNIFNKSKCSH 54
>AJ537449-1|CAD61327.1| 234|Drosophila melanogaster osp-white
chimeric protein protein.
Length = 234
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 329 LPTAPRRTVSVRTDLFRVAGTISGGKCRKFKVFIPHLLNTSKCLH 195
+P AP ++ AG + + + F P++ N SKC H
Sbjct: 10 VPAAPSKSAPPTPTTTGAAGATTNARTADCRKFTPNIFNKSKCSH 54
>AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA
protein.
Length = 1125
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -2
Query: 251 CRK---FKVFIPHLLNTSKCLHANCSLTYPLDLSDCIALIT--WRLGIFSRSGC 105
CRK +K F+ + +C+ + T P+ SDC L LG R+GC
Sbjct: 361 CRKTYFYKRFLEKHIRRGRCVKKRRNQTRPMQCSDCHVLFPTGHHLGWHKRTGC 414
>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
isoform B protein.
Length = 1373
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 329 LPTAPRRTVSVRTDLFRVAGTISGGKCRKFKVFIPHLLNTSKCLH 195
+P AP ++ AG + + + F P++ N SKC H
Sbjct: 10 VPAAPSKSAPPTPTTTGAAGATTNARTADCRKFTPNIFNKSKCSH 54
>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
isoform A protein.
Length = 1553
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 329 LPTAPRRTVSVRTDLFRVAGTISGGKCRKFKVFIPHLLNTSKCLH 195
+P AP ++ AG + + + F P++ N SKC H
Sbjct: 10 VPAAPSKSAPPTPTTTGAAGATTNARTADCRKFTPNIFNKSKCSH 54
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 764 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 785 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 198 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 109
P E+ + S + + LH F + RD+L+IW
Sbjct: 785 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,822,523
Number of Sequences: 53049
Number of extensions: 312612
Number of successful extensions: 1025
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1086986940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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