Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M02
         (593 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse...    29   9.4  
AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.     29   9.4  
AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.     29   9.4  
AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc fi...    29   9.4  

>BC067128-1|AAH67128.1| 1189|Homo sapiens hairless homolog (mouse)
           protein.
          Length = 1189

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 380 HEASTQRTRNSTFTFTGEIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDD 559
           H   +Q+ R S     GE++ + +     S+     G+G  +R S+    HL+ G+G D 
Sbjct: 510 HACHSQQVRRSPLG--GELQ-QEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLG-DR 565

Query: 560 LCRVASRE 583
           LCR+  RE
Sbjct: 566 LCRLLRRE 573


>AJ277249-1|CAB87577.2| 1189|Homo sapiens hairless protein protein.
          Length = 1189

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 380 HEASTQRTRNSTFTFTGEIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDD 559
           H   +Q+ R S     GE++ + +     S+     G+G  +R S+    HL+ G+G D 
Sbjct: 510 HACHSQQVRRSPLG--GELQ-QEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLG-DR 565

Query: 560 LCRVASRE 583
           LCR+  RE
Sbjct: 566 LCRLLRRE 573


>AJ277165-1|CAB86602.1| 1189|Homo sapiens hairless protein protein.
          Length = 1189

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 380 HEASTQRTRNSTFTFTGEIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDD 559
           H   +Q+ R S     GE++ + +     S+     G+G  +R S+    HL+ G+G D 
Sbjct: 510 HACHSQQVRRSPLG--GELQ-QEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLG-DR 565

Query: 560 LCRVASRE 583
           LCR+  RE
Sbjct: 566 LCRLLRRE 573


>AF039196-1|AAC32258.3| 1189|Homo sapiens putative single zinc
           finger transcription factor protein protein.
          Length = 1189

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +2

Query: 380 HEASTQRTRNSTFTFTGEIR*KSQVPGLLSTVTVSGGAGVATRSSSSAPAHLIRGVGRDD 559
           H   +Q+ R S     GE++ + +     S+     G+G  +R S+    HL+ G+G D 
Sbjct: 510 HACHSQQVRRSPLG--GELQ-QEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLG-DR 565

Query: 560 LCRVASRE 583
           LCR+  RE
Sbjct: 566 LCRLLRRE 573


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,550,904
Number of Sequences: 237096
Number of extensions: 1879948
Number of successful extensions: 6333
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6332
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)