Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M02
         (593 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.14 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   2.3  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   5.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   5.2  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   6.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 19  GALNYGSPGCRIRHERLQKLLITVTSYHVCAV 114
           G L Y    CR RHE     +I  T  HVC V
Sbjct: 513 GILVYEPSACRPRHEIRSTDVIPGTQEHVCGV 544


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 144 CYVVGFKLHMYGADVIRSHCNQ 79
           C V+G K+     +V+ +HCN+
Sbjct: 46  CDVIGKKIKELLPEVLNNHCNR 67


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = -3

Query: 519 DDDDRVATP--APPETVTVDK 463
           +D+D  ATP  APP+  T DK
Sbjct: 218 EDEDDGATPRKAPPQLSTTDK 238


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 413 WSFGCAVWRLRGSLQRRGLA 354
           W  GC V+ + GS+   G A
Sbjct: 125 WEIGCDVYSVFGSISGMGQA 144


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 522 ADDDDRVATPAPPETVTVDKSP 457
           ADD D     A P   T DK P
Sbjct: 40  ADDSDEEELSARPSFKTFDKGP 61


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 413 WSFGCAVWRLRGSLQRRGLA 354
           W  GC V+ + GS+   G A
Sbjct: 125 WEIGCDVYSVFGSISGMGQA 144


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 491 PPRRPLRSIKVLEPDSSTG 435
           PP RP R  +  EP++  G
Sbjct: 25  PPTRPTRLRREAEPEAEPG 43


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 543 PRMRCAGADDDDRVATPAPPETVT 472
           P + CA     D V+T +   TVT
Sbjct: 347 PSLACAAEPSSDAVSTTSGTTTVT 370


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 549  PTPRMRCAGADDDDRVATPAPPETVT 472
            P+P  R    D  DR+ +P  P +++
Sbjct: 1379 PSPSDRGRNDDGSDRLTSPPTPLSIS 1404


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,593
Number of Sequences: 438
Number of extensions: 3345
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)