BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_M01
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0620 - 19321612-19323237 140 7e-34
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 126 9e-30
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 83 2e-16
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 73 2e-13
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 71 5e-13
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 64 8e-11
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 62 4e-10
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 61 7e-10
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 58 5e-09
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 54 8e-08
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 43 2e-04
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 29 2.0
02_04_0386 - 22529291-22529418,22529860-22529941 29 3.5
01_06_1038 - 33997124-33997177,33997256-33997318,33997456-339975... 28 4.6
01_05_0455 + 22387512-22387629,22388344-22388852 28 6.1
06_03_1445 - 30209354-30209396,30209798-30209875,30210220-302102... 27 8.0
06_03_1433 - 30129184-30129226,30129628-30129705,30130050-301301... 27 8.0
06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280... 27 8.0
06_03_0135 + 17049018-17049472,17049591-17049677,17049783-170498... 27 8.0
04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692 27 8.0
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 27 8.0
>10_08_0620 - 19321612-19323237
Length = 541
Score = 140 bits (339), Expect = 7e-34
Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Frame = +1
Query: 13 LVEEVNESGG---KYIKMTGCSQXXXXXXXXXXXXXXXXXXEAARSLHDALCVVRCVARR 183
LVEE++ G K +K+TG EA RSLHDA CV+RC+ +
Sbjct: 361 LVEEISVGDGNNNKIVKITGIKNMGRTATVLVRGSNQMVIDEAQRSLHDAFCVIRCLVNK 420
Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVPSTLAENAGLNPIETVT 363
+ YC+R +A+ALEV+P TLAENAGL+PI TVT
Sbjct: 421 RFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAEALEVIPYTLAENAGLDPISTVT 480
Query: 364 ELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHVTSSALALATETVRAILKID 543
ELR HA+ GE +AG+NVR+GR+T++ E+V+QPL V++SA+ LA E VR ILKID
Sbjct: 481 ELRNRHAK----GE-KNAGINVRKGRITNILEENVVQPLLVSTSAVTLACECVRMILKID 535
Query: 544 DIV 552
DIV
Sbjct: 536 DIV 538
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 126 bits (305), Expect = 9e-30
Identities = 78/197 (39%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
Frame = +1
Query: 10 DLVEEVNESGGKYIKMTGCSQXXXXXXXXXXXXXXXXXXEAARSLHDALCVVR------- 168
DLVEEV+ K +K+ G EA RSLHDALCV+R
Sbjct: 356 DLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSLHDALCVIRLVSGLIN 415
Query: 169 ---------CVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVPST 321
C+ + + YC++ +A+ALEV+P T
Sbjct: 416 ELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYT 475
Query: 322 LAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHVTSSAL 501
LAENAGLNPI VTELR HA+ GE +AG+NVR+G++T++ E+V+QPL V++SA+
Sbjct: 476 LAENAGLNPISIVTELRNRHAK----GE-KNAGINVRKGQITNILEENVVQPLLVSTSAI 530
Query: 502 ALATETVRAILKIDDIV 552
LA E VR ILKIDDIV
Sbjct: 531 TLACECVRMILKIDDIV 547
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 82.6 bits (195), Expect = 2e-16
Identities = 43/143 (30%), Positives = 72/143 (50%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
E RSLHDALCV R + R + Y +R++ADAL+
Sbjct: 393 ETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALD 452
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
+P LAEN+GL+PI+T+T +++ + ++ G++ M+ ++V + L
Sbjct: 453 AIPLALAENSGLSPIDTLTAVKSQQVKESN----PHCGIDCNDVGTNHMKEQNVFETLIG 508
Query: 487 TSSALALATETVRAILKIDDIVN 555
+ LAT+ V+ ILKIDD+++
Sbjct: 509 KQQQILLATQVVKMILKIDDVIS 531
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 72.5 bits (170), Expect = 2e-13
Identities = 43/142 (30%), Positives = 66/142 (46%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
EA RSLHDA+ +VR + + + ++A ALE
Sbjct: 387 EAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKALE 446
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
V+P L +NAG + + + +LR HA SGE ++ GV++ G + D A V +P V
Sbjct: 447 VIPRQLCDNAGFDATDVLNKLRQKHA----SGEGANFGVDINTGGIADSFANFVWEPAVV 502
Query: 487 TSSALALATETVRAILKIDDIV 552
+A+ ATE IL +D+ V
Sbjct: 503 KINAINAATEAACLILSVDETV 524
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 71.3 bits (167), Expect = 5e-13
Identities = 42/142 (29%), Positives = 68/142 (47%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
EA RSLHDALCV+ + + A++ AL+
Sbjct: 378 EAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQ 437
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
+P+ +A+NAGL+ E +++LRA H + E +AG++V G V DM+ + + V
Sbjct: 438 AIPTIIADNAGLDSAELISQLRAEHHK-----ENCTAGIDVITGSVGDMQKRGISEAFKV 492
Query: 487 TSSALALATETVRAILKIDDIV 552
+ L ATE IL++D+I+
Sbjct: 493 KQAILLSATEAAEMILRVDEII 514
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 64.1 bits (149), Expect = 8e-11
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
E RSLHDALC+V+ + + +A++L
Sbjct: 372 EIDRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLL 431
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARA---ADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
++P L+ NA + E V +LRA H A AD SS G+++ +G + + V++P
Sbjct: 432 IIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLDLSKGIIRNNLEYGVIEP 491
Query: 478 LHVTSSALALATETVRAILKIDDIV 552
+ ATE IL+IDD++
Sbjct: 492 AMSKVKIIQFATEAAITILRIDDMI 516
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 61.7 bits (143), Expect = 4e-10
Identities = 39/143 (27%), Positives = 61/143 (42%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
E R+L DA+ V R + + + + A A A E
Sbjct: 388 EVERNLQDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAAALAFE 447
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
+P TLA+N GLN I +T+L+ A+ GE + G++ R G + DM+ + V
Sbjct: 448 AIPRTLAQNCGLNVIRIMTQLQGKDMLHAN-GENAWVGIDGRSGDIVDMKERKIWDSYSV 506
Query: 487 TSSALALATETVRAILKIDDIVN 555
+ A E +L+IDDIV+
Sbjct: 507 KAQTFKTAIEAACMLLRIDDIVS 529
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 60.9 bits (141), Expect = 7e-10
Identities = 38/143 (26%), Positives = 61/143 (42%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
E R+L DA+ + R + + + + A A A E
Sbjct: 388 EVERNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFE 447
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
+P TL +N GLN I T+T+L+ HA +GE + G++ G + DM+ + V
Sbjct: 448 AIPRTLLQNCGLNVIRTMTQLQGKHA----NGENAWVGIDGSSGDIVDMKERKIWDSYSV 503
Query: 487 TSSALALATETVRAILKIDDIVN 555
+ A E +L+IDDIV+
Sbjct: 504 KAQTFKTAIEAACMLLRIDDIVS 526
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 58.0 bits (134), Expect = 5e-09
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Frame = +1
Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
EA RSLHDALCV+ + + A++ AL+
Sbjct: 355 EAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSRALQ 414
Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRG-----------RVTDM 453
+P+ +A+NAGL+ + +++LRA H + E S+AG++V G +V DM
Sbjct: 415 SIPTIIADNAGLDSADLISQLRAEHHK-----EQSTAGIDVISGGGLELILRLLPQVGDM 469
Query: 454 RAEHVLQPLHVTSSALALATETVRAILKIDDIV 552
+ + + L ATE IL++D+IV
Sbjct: 470 EKLGISESFKAKQAVLMSATEAAEMILRVDEIV 502
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 268 DHYCLRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVT 447
D Y + +A++ E+VP TLAENAGL+ +E ++ L A HA G + G+++ G
Sbjct: 432 DQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHA-----GGNTKVGIDLEEGGCK 486
Query: 448 DMRAEHVLQPLHVTS-SALALATETVRAILKIDDIV 552
D+ + L+VT AL + + +L++D I+
Sbjct: 487 DVSIMKIWD-LYVTKLFALKYSADAACTVLRVDQII 521
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/91 (29%), Positives = 44/91 (48%)
Frame = +1
Query: 280 LRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRA 459
+ A+ADAL V+P TLAEN+GL+ + + L+ H D G V G+N G D +
Sbjct: 457 VEAFADALLVIPKTLAENSGLDTQDVIVSLQNEH----DRGLV--VGLNHHSGEPIDPQM 510
Query: 460 EHVLQPLHVTSSALALATETVRAILKIDDIV 552
E + V + +L +D+++
Sbjct: 511 EGIFDNYSVKRQIINSGPIIASQLLLVDEVI 541
>09_04_0594 - 18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 280 LRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRR 435
L A D++ P+ AEN GLN T+ + + ++ EVSS +N RR
Sbjct: 1045 LSALLDSVPSSPAMAAENIGLN--RTLQRISSFRSQQPAREEVSSTLINTRR 1094
>02_04_0386 - 22529291-22529418,22529860-22529941
Length = 69
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 563 FIVFTMSSILSIARTVSVASASAEL--VTCKGC 471
F+VFT+ +++ + V VASA + CKGC
Sbjct: 7 FVVFTLLMLVAASAVVDVASADGKCGPCNCKGC 39
>01_06_1038 -
33997124-33997177,33997256-33997318,33997456-33997506,
33998100-33998257,33998406-33998491,33998674-33999527
Length = 421
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 358 VTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
+TE+ A+ AR SGE ++A V G V + E P
Sbjct: 210 ITEMAASTARDGVSGETTAAAKEVSSGEVAPVEEEEASAP 249
>01_05_0455 + 22387512-22387629,22388344-22388852
Length = 208
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 163 QHKARRVESAQLPPPQRHSFRVLQRKLCVHPDCIPS 56
QHK R E + +H L L + PDC+PS
Sbjct: 79 QHKPLRKEPSTRSATAKHGLLSLGLNLRLEPDCLPS 114
>06_03_1445 -
30209354-30209396,30209798-30209875,30210220-30210285,
30212275-30212322,30212408-30212571,30212726-30213581,
30213673-30213786,30213853-30213996,30214075-30214304,
30214584-30214724,30214810-30214887,30214972-30215053,
30215130-30215184,30215284-30215407,30215548-30215641,
30215718-30215794,30215873-30215982,30216058-30216655
Length = 1033
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
P +AR H + +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471
>06_03_1433 -
30129184-30129226,30129628-30129705,30130050-30130115,
30132105-30132152,30132238-30132401,30132556-30133411,
30133503-30133616,30133683-30133826,30133905-30134134,
30134414-30134554,30134640-30134717,30134802-30134883,
30134958-30135012,30135112-30135235,30135376-30135469,
30135546-30135622,30135701-30135810,30135886-30136483
Length = 1033
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
P +AR H + +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471
>06_03_1416 +
30027066-30027663,30027739-30027848,30027927-30028003,
30028080-30028173,30028314-30028437,30028537-30028591,
30028666-30028747,30028832-30028909,30028995-30029135,
30029416-30029645,30029724-30029867,30029934-30030047,
30030139-30030994,30031149-30031312,30031398-30031445,
30033435-30033500,30033845-30033922,30034324-30034366
Length = 1033
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
P +AR H + +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471
>06_03_0135 +
17049018-17049472,17049591-17049677,17049783-17049839,
17049953-17050191,17050753-17050871,17051002-17051088,
17051198-17051257
Length = 367
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 447 GDATAAHVHACAGHLPAVGSAGVRSA*LGHCF-YWIETGVL 328
G A H+ C + A G G R A LG+ YWI GVL
Sbjct: 73 GAAALCHLGVCWALVHAAGM-GSRGAALGNAVSYWINVGVL 112
>04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692
Length = 1171
Score = 27.5 bits (58), Expect = 8.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 301 LEVVPSTLAENAGLNPIE-TVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
L ++ S ++ +P++ V E+ AR EVS+ N+R + D ++ P
Sbjct: 100 LRLLASCSCKSEAASPLDQAVAEIELLKARVE---EVSNR--NIRYSLINDSGSKPAAMP 154
Query: 478 LHVTSSALALATETV 522
H+ S+A A+ T V
Sbjct: 155 RHLASAASAVGTSAV 169
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 27.5 bits (58), Expect = 8.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 370 RAAHARAADSGEVSSAGVNVRR-GRVTDMRAEHVLQPLHVTSSALALATETVRA 528
RA +AA+ + A + R R+ HV+Q L T +A+A+ATE V A
Sbjct: 89 RAGLTKAAEDAFLDLARADAARLVRLRHPGVLHVVQALDETKAAMAMATEPVFA 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,276,519
Number of Sequences: 37544
Number of extensions: 232155
Number of successful extensions: 884
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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