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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M01
         (574 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0620 - 19321612-19323237                                        140   7e-34
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949    126   9e-30
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516...    83   2e-16
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995...    73   2e-13
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880...    71   5e-13
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...    64   8e-11
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118...    62   4e-10
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832...    61   7e-10
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648...    58   5e-09
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806...    54   8e-08
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265...    43   2e-04
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334...    29   2.0  
02_04_0386 - 22529291-22529418,22529860-22529941                       29   3.5  
01_06_1038 - 33997124-33997177,33997256-33997318,33997456-339975...    28   4.6  
01_05_0455 + 22387512-22387629,22388344-22388852                       28   6.1  
06_03_1445 - 30209354-30209396,30209798-30209875,30210220-302102...    27   8.0  
06_03_1433 - 30129184-30129226,30129628-30129705,30130050-301301...    27   8.0  
06_03_1416 + 30027066-30027663,30027739-30027848,30027927-300280...    27   8.0  
06_03_0135 + 17049018-17049472,17049591-17049677,17049783-170498...    27   8.0  
04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692           27   8.0  
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262...    27   8.0  

>10_08_0620 - 19321612-19323237
          Length = 541

 Score =  140 bits (339), Expect = 7e-34
 Identities = 79/183 (43%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
 Frame = +1

Query: 13  LVEEVNESGG---KYIKMTGCSQXXXXXXXXXXXXXXXXXXEAARSLHDALCVVRCVARR 183
           LVEE++   G   K +K+TG                     EA RSLHDA CV+RC+  +
Sbjct: 361 LVEEISVGDGNNNKIVKITGIKNMGRTATVLVRGSNQMVIDEAQRSLHDAFCVIRCLVNK 420

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVPSTLAENAGLNPIETVT 363
                                       + YC+R +A+ALEV+P TLAENAGL+PI TVT
Sbjct: 421 RFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAEALEVIPYTLAENAGLDPISTVT 480

Query: 364 ELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHVTSSALALATETVRAILKID 543
           ELR  HA+    GE  +AG+NVR+GR+T++  E+V+QPL V++SA+ LA E VR ILKID
Sbjct: 481 ELRNRHAK----GE-KNAGINVRKGRITNILEENVVQPLLVSTSAVTLACECVRMILKID 535

Query: 544 DIV 552
           DIV
Sbjct: 536 DIV 538


>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
          Length = 550

 Score =  126 bits (305), Expect = 9e-30
 Identities = 78/197 (39%), Positives = 103/197 (52%), Gaps = 16/197 (8%)
 Frame = +1

Query: 10  DLVEEVNESGGKYIKMTGCSQXXXXXXXXXXXXXXXXXXEAARSLHDALCVVR------- 168
           DLVEEV+    K +K+ G                     EA RSLHDALCV+R       
Sbjct: 356 DLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSLHDALCVIRLVSGLIN 415

Query: 169 ---------CVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALEVVPST 321
                    C+  +                            + YC++ +A+ALEV+P T
Sbjct: 416 ELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYT 475

Query: 322 LAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHVTSSAL 501
           LAENAGLNPI  VTELR  HA+    GE  +AG+NVR+G++T++  E+V+QPL V++SA+
Sbjct: 476 LAENAGLNPISIVTELRNRHAK----GE-KNAGINVRKGQITNILEENVVQPLLVSTSAI 530

Query: 502 ALATETVRAILKIDDIV 552
            LA E VR ILKIDDIV
Sbjct: 531 TLACECVRMILKIDDIV 547


>06_03_0477 -
           21250811-21250981,21251261-21251374,21251447-21251613,
           21252051-21252153,21252315-21252367,21252438-21252570,
           21252835-21253183,21253685-21254003,21254519-21254717
          Length = 535

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 43/143 (30%), Positives = 72/143 (50%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           E  RSLHDALCV R + R                             + Y +R++ADAL+
Sbjct: 393 ETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALD 452

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
            +P  LAEN+GL+PI+T+T +++   + ++       G++        M+ ++V + L  
Sbjct: 453 AIPLALAENSGLSPIDTLTAVKSQQVKESN----PHCGIDCNDVGTNHMKEQNVFETLIG 508

Query: 487 TSSALALATETVRAILKIDDIVN 555
               + LAT+ V+ ILKIDD+++
Sbjct: 509 KQQQILLATQVVKMILKIDDVIS 531


>06_03_1193 -
           28298656-28298754,28299303-28299377,28299456-28299544,
           28299679-28299760,28300385-28300474,28300557-28300655,
           28300733-28300852,28300968-28301084,28301174-28301309,
           28301415-28301584,28301744-28301947,28302032-28302157,
           28302841-28303101,28303215-28303229
          Length = 560

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 43/142 (30%), Positives = 66/142 (46%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           EA RSLHDA+ +VR   +                               + + ++A ALE
Sbjct: 387 EAERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKALE 446

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
           V+P  L +NAG +  + + +LR  HA    SGE ++ GV++  G + D  A  V +P  V
Sbjct: 447 VIPRQLCDNAGFDATDVLNKLRQKHA----SGEGANFGVDINTGGIADSFANFVWEPAVV 502

Query: 487 TSSALALATETVRAILKIDDIV 552
             +A+  ATE    IL +D+ V
Sbjct: 503 KINAINAATEAACLILSVDETV 524


>03_05_0339 +
           23287620-23287676,23287784-23287849,23287937-23288048,
           23288240-23288368,23288795-23288866,23289245-23289360,
           23289494-23289570,23289788-23290273,23290373-23290688,
           23290769-23290915
          Length = 525

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 42/142 (29%), Positives = 68/142 (47%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           EA RSLHDALCV+                                    + + A++ AL+
Sbjct: 378 EAERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQ 437

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
            +P+ +A+NAGL+  E +++LRA H +     E  +AG++V  G V DM+   + +   V
Sbjct: 438 AIPTIIADNAGLDSAELISQLRAEHHK-----ENCTAGIDVITGSVGDMQKRGISEAFKV 492

Query: 487 TSSALALATETVRAILKIDDIV 552
             + L  ATE    IL++D+I+
Sbjct: 493 KQAILLSATEAAEMILRVDEII 514


>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 3/145 (2%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           E  RSLHDALC+V+                                 +   +  +A++L 
Sbjct: 372 EIDRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLL 431

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARA---ADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
           ++P  L+ NA  +  E V +LRA H  A   AD    SS G+++ +G + +     V++P
Sbjct: 432 IIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLDLSKGIIRNNLEYGVIEP 491

Query: 478 LHVTSSALALATETVRAILKIDDIV 552
                  +  ATE    IL+IDD++
Sbjct: 492 AMSKVKIIQFATEAAITILRIDDMI 516


>06_03_0353 +
           19810945-19810975,19811308-19811369,19811741-19811813,
           19813292-19813359,19813496-19813565,19813908-19813976,
           19814065-19814136,19814247-19814320,19814420-19814697,
           19814804-19815188,19815268-19815393,19815583-19815687,
           19815986-19815994,19817040-19817114,19817202-19817390
          Length = 561

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 39/143 (27%), Positives = 61/143 (42%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           E  R+L DA+ V R + +                             + +   A A A E
Sbjct: 388 EVERNLQDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAAALAFE 447

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
            +P TLA+N GLN I  +T+L+      A+ GE +  G++ R G + DM+   +     V
Sbjct: 448 AIPRTLAQNCGLNVIRIMTQLQGKDMLHAN-GENAWVGIDGRSGDIVDMKERKIWDSYSV 506

Query: 487 TSSALALATETVRAILKIDDIVN 555
            +     A E    +L+IDDIV+
Sbjct: 507 KAQTFKTAIEAACMLLRIDDIVS 529


>02_02_0253 -
           8325437-8325628,8325705-8325779,8325933-8326037,
           8326249-8326374,8326451-8326835,8326931-8327208,
           8327294-8327367,8327476-8327547,8327637-8327705,
           8340132-8340201,8340806-8340873,8341571-8341643,
           8341807-8341868,8342168-8342198
          Length = 559

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 38/143 (26%), Positives = 61/143 (42%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           E  R+L DA+ + R + +                             + +   A A A E
Sbjct: 388 EVERNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFE 447

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQPLHV 486
            +P TL +N GLN I T+T+L+  HA    +GE +  G++   G + DM+   +     V
Sbjct: 448 AIPRTLLQNCGLNVIRTMTQLQGKHA----NGENAWVGIDGSSGDIVDMKERKIWDSYSV 503

Query: 487 TSSALALATETVRAILKIDDIVN 555
            +     A E    +L+IDDIV+
Sbjct: 504 KAQTFKTAIEAACMLLRIDDIVS 526


>05_07_0067 +
           27463703-27463705,27464309-27464365,27464779-27464844,
           27464985-27465096,27465281-27465409,27466076-27466191,
           27466364-27466440,27466678-27467163,27467255-27467570,
           27467618-27467797
          Length = 513

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
 Frame = +1

Query: 127 EAARSLHDALCVVRCVARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHYCLRAYADALE 306
           EA RSLHDALCV+                                    + + A++ AL+
Sbjct: 355 EAERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSRALQ 414

Query: 307 VVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRG-----------RVTDM 453
            +P+ +A+NAGL+  + +++LRA H +     E S+AG++V  G           +V DM
Sbjct: 415 SIPTIIADNAGLDSADLISQLRAEHHK-----EQSTAGIDVISGGGLELILRLLPQVGDM 469

Query: 454 RAEHVLQPLHVTSSALALATETVRAILKIDDIV 552
               + +      + L  ATE    IL++D+IV
Sbjct: 470 EKLGISESFKAKQAVLMSATEAAEMILRVDEIV 502


>03_06_0362 +
           33379489-33379624,33380161-33380423,33380524-33380670,
           33380753-33380914,33381681-33381758,33382329-33382462,
           33382702-33382774,33382852-33382929,33383002-33383124,
           33383223-33383317,33383723-33383932,33384115-33384172,
           33384268-33384333
          Length = 540

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = +1

Query: 268 DHYCLRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVT 447
           D Y +  +A++ E+VP TLAENAGL+ +E ++ L A HA     G  +  G+++  G   
Sbjct: 432 DQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHA-----GGNTKVGIDLEEGGCK 486

Query: 448 DMRAEHVLQPLHVTS-SALALATETVRAILKIDDIV 552
           D+    +   L+VT   AL  + +    +L++D I+
Sbjct: 487 DVSIMKIWD-LYVTKLFALKYSADAACTVLRVDQII 521


>05_01_0337 -
           2658647-2658722,2658797-2658915,2658995-2659102,
           2659187-2659255,2659561-2659655,2659740-2659944,
           2660125-2660211,2660291-2660405,2660696-2660802,
           2661054-2661146,2661243-2661290,2661345-2661544,
           2661993-2662128,2662228-2662291,2662779-2662912
          Length = 551

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 27/91 (29%), Positives = 44/91 (48%)
 Frame = +1

Query: 280 LRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRA 459
           + A+ADAL V+P TLAEN+GL+  + +  L+  H    D G V   G+N   G   D + 
Sbjct: 457 VEAFADALLVIPKTLAENSGLDTQDVIVSLQNEH----DRGLV--VGLNHHSGEPIDPQM 510

Query: 460 EHVLQPLHVTSSALALATETVRAILKIDDIV 552
           E +     V    +         +L +D+++
Sbjct: 511 EGIFDNYSVKRQIINSGPIIASQLLLVDEVI 541


>09_04_0594 - 18831011-18831360,18831562-18832111,18832364-18833406,
            18833496-18833760,18835194-18835340,18835431-18835511,
            18835626-18835804,18835935-18836093,18836269-18836398,
            18836935-18837094,18837337-18837419,18837865-18837915,
            18838035-18838151,18838273-18838359
          Length = 1133

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 280  LRAYADALEVVPSTLAENAGLNPIETVTELRAAHARAADSGEVSSAGVNVRR 435
            L A  D++   P+  AEN GLN   T+  + +  ++     EVSS  +N RR
Sbjct: 1045 LSALLDSVPSSPAMAAENIGLN--RTLQRISSFRSQQPAREEVSSTLINTRR 1094


>02_04_0386 - 22529291-22529418,22529860-22529941
          Length = 69

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -3

Query: 563 FIVFTMSSILSIARTVSVASASAEL--VTCKGC 471
           F+VFT+  +++ +  V VASA  +     CKGC
Sbjct: 7   FVVFTLLMLVAASAVVDVASADGKCGPCNCKGC 39


>01_06_1038 -
           33997124-33997177,33997256-33997318,33997456-33997506,
           33998100-33998257,33998406-33998491,33998674-33999527
          Length = 421

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 358 VTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
           +TE+ A+ AR   SGE ++A   V  G V  +  E    P
Sbjct: 210 ITEMAASTARDGVSGETTAAAKEVSSGEVAPVEEEEASAP 249


>01_05_0455 + 22387512-22387629,22388344-22388852
          Length = 208

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 163 QHKARRVESAQLPPPQRHSFRVLQRKLCVHPDCIPS 56
           QHK  R E +      +H    L   L + PDC+PS
Sbjct: 79  QHKPLRKEPSTRSATAKHGLLSLGLNLRLEPDCLPS 114


>06_03_1445 -
           30209354-30209396,30209798-30209875,30210220-30210285,
           30212275-30212322,30212408-30212571,30212726-30213581,
           30213673-30213786,30213853-30213996,30214075-30214304,
           30214584-30214724,30214810-30214887,30214972-30215053,
           30215130-30215184,30215284-30215407,30215548-30215641,
           30215718-30215794,30215873-30215982,30216058-30216655
          Length = 1033

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
           P +AR    H  +  +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471


>06_03_1433 -
           30129184-30129226,30129628-30129705,30130050-30130115,
           30132105-30132152,30132238-30132401,30132556-30133411,
           30133503-30133616,30133683-30133826,30133905-30134134,
           30134414-30134554,30134640-30134717,30134802-30134883,
           30134958-30135012,30135112-30135235,30135376-30135469,
           30135546-30135622,30135701-30135810,30135886-30136483
          Length = 1033

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
           P +AR    H  +  +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471


>06_03_1416 +
           30027066-30027663,30027739-30027848,30027927-30028003,
           30028080-30028173,30028314-30028437,30028537-30028591,
           30028666-30028747,30028832-30028909,30028995-30029135,
           30029416-30029645,30029724-30029867,30029934-30030047,
           30030139-30030994,30031149-30031312,30031398-30031445,
           30033435-30033500,30033845-30033922,30034324-30034366
          Length = 1033

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 187 PDAARHNVQHK-ARRVESAQLPPPQRHS 107
           P +AR    H  +  +ES+Q PPP RHS
Sbjct: 444 PHSARQTQHHSVSSSLESSQGPPPVRHS 471


>06_03_0135 +
           17049018-17049472,17049591-17049677,17049783-17049839,
           17049953-17050191,17050753-17050871,17051002-17051088,
           17051198-17051257
          Length = 367

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 447 GDATAAHVHACAGHLPAVGSAGVRSA*LGHCF-YWIETGVL 328
           G A   H+  C   + A G  G R A LG+   YWI  GVL
Sbjct: 73  GAAALCHLGVCWALVHAAGM-GSRGAALGNAVSYWINVGVL 112


>04_01_0545 + 7046861-7047955,7048822-7049436,7052887-7054692
          Length = 1171

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +1

Query: 301 LEVVPSTLAENAGLNPIE-TVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHVLQP 477
           L ++ S   ++   +P++  V E+    AR     EVS+   N+R   + D  ++    P
Sbjct: 100 LRLLASCSCKSEAASPLDQAVAEIELLKARVE---EVSNR--NIRYSLINDSGSKPAAMP 154

Query: 478 LHVTSSALALATETV 522
            H+ S+A A+ T  V
Sbjct: 155 RHLASAASAVGTSAV 169


>01_05_0705 +
           24424457-24424948,24425520-24425624,24426097-24426207,
           24426675-24426857,24427066-24427192,24427336-24427397,
           24427638-24427724,24428703-24428789,24429210-24429323,
           24429507-24429635,24429834-24429896,24430333-24430494,
           24430611-24430729,24430786-24431794
          Length = 949

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 370 RAAHARAADSGEVSSAGVNVRR-GRVTDMRAEHVLQPLHVTSSALALATETVRA 528
           RA   +AA+   +  A  +  R  R+      HV+Q L  T +A+A+ATE V A
Sbjct: 89  RAGLTKAAEDAFLDLARADAARLVRLRHPGVLHVVQALDETKAAMAMATEPVFA 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,276,519
Number of Sequences: 37544
Number of extensions: 232155
Number of successful extensions: 884
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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