Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_M01
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    27   0.57 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   3.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.1  
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   7.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.1  

>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -2

Query: 273 VVSSGGSYRSASQC-RGGGCLGCS 205
           VVS GG Y S+  C RGG  +GC+
Sbjct: 17  VVSVGGQYCSSDLCPRGGPHVGCN 40


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 8/41 (19%)
 Frame = -3

Query: 536 LSIARTVSVASA--SAE------LVTCKGCSTCSARMSVTR 438
           L +   +S+ASA  SAE      L+   GCS C+A+ +V R
Sbjct: 113 LRLCPRISIASAHPSAEMNWSIVLIVAAGCSICAAQTTVKR 153


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 181 AARHNVQHKARRVESAQLPPPQRHSFRVLQRKLCVHP 71
           A  H++ H      +AQ PPP  H     Q +L  HP
Sbjct: 814 AGSHHLHHLHHH--AAQQPPPGSHPGAQTQPQLSQHP 848


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 340 LNPIETVTELRAAHARAADSGEVSSAGVNVRRGRVTDMRAEHV 468
           L+P E     R  HARA   G V+S      +   T+M+   V
Sbjct: 30  LHP-EGCVRSREEHARAGQEGNVASLRTQEAQNTSTEMKLAKV 71


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 530 IARTVSVASASAELVTCKGCSTCSARMSVTRPR 432
           +A T     ++ +L TC G +TCS  +  T  R
Sbjct: 20  VADTTLGQLSNYQLTTCPGKTTCSQCIQTTNCR 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,943
Number of Sequences: 2352
Number of extensions: 8192
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)