Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L21
(571 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 32 0.47
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 32 0.47
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 32 0.63
AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p pro... 29 5.8
AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-P... 29 5.8
BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p pro... 28 7.7
AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcriptio... 28 7.7
AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptio... 28 7.7
AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptio... 28 7.7
AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD... 28 7.7
AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA... 28 7.7
AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC... 28 7.7
AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB... 28 7.7
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 282 VSKKARLAVHRGVLVPTLMHGRECW-VWQKKHESKMNGVEMRSLRRITGVRIIDKVRNRI 458
+S ++ +++ +L P L +G + + + K H +K+ ++ ++LRRI+G + R+
Sbjct: 791 LSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIE 850
Query: 459 RD 464
RD
Sbjct: 851 RD 852
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/62 (25%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +3
Query: 282 VSKKARLAVHRGVLVPTLMHGRECW-VWQKKHESKMNGVEMRSLRRITGVRIIDKVRNRI 458
+S ++ +++ +L P L +G + + + K H +K+ ++ ++LRRI+G + R+
Sbjct: 593 LSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIE 652
Query: 459 RD 464
RD
Sbjct: 653 RD 654
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 20 IVDPPGCRNSARGR 61
+VDPPGCRNSAR R
Sbjct: 12 LVDPPGCRNSARDR 25
>AY113617-1|AAM29622.1| 359|Drosophila melanogaster RH65663p
protein.
Length = 359
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 366 KKHESKMNGVEMRSLRRITGVRIIDKVRNRIRDHYDVME 482
KK E + +E R ++I +DK+ N+ HYD +E
Sbjct: 19 KKREIQQQEIEFRK-KKIEEELKLDKIENKFATHYDAVE 56
>AE014297-4194|AAF56759.1| 359|Drosophila melanogaster CG12259-PA
protein.
Length = 359
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 366 KKHESKMNGVEMRSLRRITGVRIIDKVRNRIRDHYDVME 482
KK E + +E R ++I +DK+ N+ HYD +E
Sbjct: 19 KKREIQQQEIEFRK-KKIEEELKLDKIENKFATHYDAVE 56
>BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p protein.
Length = 2062
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
>AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcription
factor protein.
Length = 2061
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
>AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1751
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1182 KEEEWREAQKTFNKQWREQN 1201
>AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1773
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1182 KEEEWREAQKTFNKQWREQN 1201
>AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD,
isoform D protein.
Length = 1751
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
>AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA,
isoform A protein.
Length = 1776
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
>AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC,
isoform C protein.
Length = 2062
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
>AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB,
isoform B protein.
Length = 2062
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KQDEWRRDEKSKKNNWRENN 436
K++EWR +K+ WRE N
Sbjct: 1185 KEEEWREAQKTFNKQWREQN 1204
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,430,755
Number of Sequences: 53049
Number of extensions: 363215
Number of successful extensions: 1036
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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