Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L21
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 25 0.53
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 3.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 4.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.6
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 25.0 bits (52), Expect = 0.53
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 69 CKILPRAEFLQPGGS 25
C+I + EFL PGGS
Sbjct: 62 CEIYAKCEFLNPGGS 76
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 3.7
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 270 CSQNVSKKARLAVHRGVLVPTLMHGRECWVWQKKHESKMNGVEMRSLRRITGVR 431
CS++ S K L+VHR + T +C V ++ E +G R +R TG R
Sbjct: 125 CSKSFSVKENLSVHR--RIHTKERPYKCDVCERAFEH--SGKLHRHMRIHTGER 174
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.9
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQKKHESKMNGVEMR-----SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q++ E + + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLTKKMILEYELRRIREIEKLGSERSKSR 83
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 4.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + LRRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKLGSERSKSR 83
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.6
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +3
Query: 333 LMHGRECWVWQ----KKHESKMNGVEMR-SLRRITGVRIIDKVRNRIR 461
L H RE W+ Q ++H+ M + + +RRI + + R++ R
Sbjct: 36 LQHRREAWLIQQEREREHQRLMKKMILEYEIRRIREIEKLGSERSKSR 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,916
Number of Sequences: 438
Number of extensions: 2559
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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