Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L17
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 36 0.013
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 36 0.013
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 34 0.052
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.36
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.36
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 31 0.36
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z27079-8|CAA81595.2| 798|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.6
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 28 3.4
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 28 3.4
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 28 3.4
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 28 3.4
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 28 3.4
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 28 3.4
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 28 4.5
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 28 4.5
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 28 4.5
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
LE +L++ E L A+L+A R +Q DEL+KL + ELK+ + A+
Sbjct: 1031 LESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAETMWQAE 1083
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
LE +L++ E L A+L+A R +Q DEL+KL + ELK+ + A+
Sbjct: 1033 LESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAETMWQAE 1085
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
LE +L++ E L A+L+A R +Q DEL+KL + ELK+ + A+
Sbjct: 1033 LESRLTQRERVVESLEADLAAVRNIEQEKLDELQKLKEEFDELKKAETMWQAE 1085
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 34.3 bits (75), Expect = 0.052
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 RLEGQLSRVRDAHEQLAAELSAARQRDQHSA-DELRKLTRQLRELKEENSTLNAKL 367
+L+ ++ +H++ AE+ +D H A DE+ KLT Q +LK +N TL +L
Sbjct: 610 QLQEDQTKFLGSHDETKAEM----MKDLHEAQDEIEKLTNQAGQLKSKNETLTTEL 661
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 34.3 bits (75), Expect = 0.052
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 RLEGQLSRVRDAHEQLAAELSAARQRDQHSA-DELRKLTRQLRELKEENSTLNAKL 367
+L+ ++ +H++ AE+ +D H A DE+ KLT Q +LK +N TL +L
Sbjct: 610 QLQEDQTKFLGSHDETKAEM----MKDLHEAQDEIEKLTNQAGQLKSKNETLTTEL 661
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 221 SRVRDAHEQLAAELSAARQRDQHSAD---ELRKLTRQLRE 331
+RV+D H+QLA E A ++ D+ AD E +LT QL +
Sbjct: 1129 ARVKDLHDQLADEKDARQRADRSRADQQAEYDELTEQLED 1168
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 221 SRVRDAHEQLAAELSAARQRDQHSAD---ELRKLTRQLRE 331
+RV+D H+QLA E A ++ D+ AD E +LT QL +
Sbjct: 1129 ARVKDLHDQLADEKDARQRADRSRADQQAEYDELTEQLED 1168
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +2
Query: 221 SRVRDAHEQLAAELSAARQRDQHSAD---ELRKLTRQLRE 331
+RV+D H+QLA E A ++ D+ AD E +LT QL +
Sbjct: 1129 ARVKDLHDQLADEKDARQRADRSRADQQAEYDELTEQLED 1168
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 203 RLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAKL 367
R+EGQ+ R + + EL + + + + ELR L E KE N L ++L
Sbjct: 307 RMEGQMKRYKSNADVAEKELDELKTQMRQTKKELRDKENALDEQKETNKHLQSRL 361
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 203 RLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAKL 367
R+EGQ+ R + + EL + + + + ELR L E KE N L ++L
Sbjct: 287 RMEGQMKRYKSNADVAEKELDELKTQMRQTKKELRDKENALDEQKETNKHLQSRL 341
>Z27079-8|CAA81595.2| 798|Caenorhabditis elegans Hypothetical
protein T05G5.8 protein.
Length = 798
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 203 RLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAKL 367
R E L +DA +L + + R+R + S + +R++TR +++L L A +
Sbjct: 82 RGEEALKHAQDAMIELEKSIGSIRERTKSSDEIVREMTRDIKQLDIAKRNLTASI 136
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 281 DQHSADELRKLTRQLRELKEENSTLNAKLG 370
D + ELR++ RQ RELK + + KLG
Sbjct: 869 DDANTPELRRILRQTRELKRKQQEIARKLG 898
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 224 RVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKE-ENSTLNAKLG 370
+V+D + EL++ RQ+++ DELR T + +L+E N K G
Sbjct: 333 QVKDLQDASENELASFRQKEKELIDELRMATNENVDLEELLKGVTNGKAG 382
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 194 ARGRLEGQLSRVRDAHEQLAAELSAAR-QRDQHSADELRKLTRQLRELKEENSTLNAKLG 370
A+ ++ QLS+ +Q A+ R + + RKLT +++E++E+ N K+G
Sbjct: 1363 AKTDVQRQLSKANSEIQQWRAKFEGEGVSRAEELEETRRKLTHKVQEMQEQLENANQKIG 1422
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 197 RGRLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
+G G++ R D Q + LS Q + +ADE+ K+ R + + + + LN+K
Sbjct: 329 QGNQSGRMVRTIDEETQTDSSLS---QANPQNADEVAKMNRIIEDHRRQIEELNSK 381
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 197 RGRLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
+G G++ R D Q + LS Q + +ADE+ K+ R + + + + LN+K
Sbjct: 396 QGNQSGRMVRTIDEETQTDSSLS---QANPQNADEVAKMNRIIEDHRRQIEELNSK 448
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 197 RGRLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
+G G++ R D Q + LS Q + +ADE+ K+ R + + + + LN+K
Sbjct: 396 QGNQSGRMVRTIDEETQTDSSLS---QANPQNADEVAKMNRIIEDHRRQIEELNSK 448
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQ-------LAAELSAARQRDQHSADELRKLTRQLRELKE 340
L G+ +R RDA Q L EL +Q +HS D ++L + +R+LKE
Sbjct: 912 LVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 963
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQ-------LAAELSAARQRDQHSADELRKLTRQLRELKE 340
L G+ +R RDA Q L EL +Q +HS D ++L + +R+LKE
Sbjct: 985 LVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1036
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 206 LEGQLSRVRDAHEQ-------LAAELSAARQRDQHSADELRKLTRQLRELKE 340
L G+ +R RDA Q L EL +Q +HS D ++L + +R+LKE
Sbjct: 985 LVGKEARARDAANQQLSRANLLNKELEDTKQDLKHSTDVNKQLEQDIRDLKE 1036
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 245 QLAAELSAARQRDQHSADELRKLTRQLRELKEENSTL 355
+L +L A + + SA+ + +LTRQ ++ EEN L
Sbjct: 366 ELRRKLDVAEDQIETSANAIERLTRQNMDILEENKNL 402
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 245 QLAAELSAARQRDQHSADELRKLTRQLRELKEENSTL 355
+L +L A + + SA+ + +LTRQ ++ EEN L
Sbjct: 725 ELRRKLDVAEDQIETSANAIERLTRQNMDILEENKNL 761
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 245 QLAAELSAARQRDQHSADELRKLTRQLRELKEENSTL 355
+L +L A + + SA+ + +LTRQ ++ EEN L
Sbjct: 729 ELRRKLDVAEDQIETSANAIERLTRQNMDILEENKNL 765
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 197 RGRLEGQLSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELKEENSTLNAK 364
+G G++ R D Q + LS Q + +ADE+ K+ R + + + + LN+K
Sbjct: 396 QGNQSGRMVRTIDEETQTDSSLS---QANPQNADEVAKMNRIIEDHRRQIEELNSK 448
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 218 LSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELK 337
L++V D L AEL + ++R Q S K R+ REL+
Sbjct: 1819 LAKVEDRVRSLEAELHSEQRRHQESIKGYTKQERRARELQ 1858
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 218 LSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELK 337
L++V D L AEL + ++R Q S K R+ REL+
Sbjct: 1819 LAKVEDRVRSLEAELHSEQRRHQESIKGYTKQERRARELQ 1858
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 218 LSRVRDAHEQLAAELSAARQRDQHSADELRKLTRQLRELK 337
L++V D L AEL + ++R Q S K R+ REL+
Sbjct: 1819 LAKVEDRVRSLEAELHSEQRRHQESIKGYTKQERRARELQ 1858
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.130 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,143,577
Number of Sequences: 27780
Number of extensions: 28432
Number of successful extensions: 271
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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