Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L16
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 251 2e-67
03_01_0547 + 4093196-4093657,4094267-4095148 251 2e-67
03_01_0544 + 4082528-4082989,4083585-4084466 251 2e-67
03_01_0543 + 4076981-4077442,4078145-4079026 251 2e-67
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 62 2e-10
02_04_0462 + 23131433-23132836 59 2e-09
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 58 3e-09
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 53 1e-07
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 46 1e-05
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 46 1e-05
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 33 0.12
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 0.88
10_08_1038 - 22485394-22485960,22486712-22487197 29 2.0
11_06_0516 + 24502645-24504507 29 2.7
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 3.5
03_03_0225 - 15587557-15588774 28 4.7
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 4.7
09_04_0749 + 19919367-19920869 27 6.2
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 6.2
02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544 27 6.2
07_03_1080 + 23815232-23817040 27 8.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 251 bits (615), Expect = 2e-67
Identities = 112/152 (73%), Positives = 134/152 (88%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVG
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGI 465
+FAE+ K+DRR+GK E PK +K+GDAG+
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGM 389
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 251 bits (615), Expect = 2e-67
Identities = 112/152 (73%), Positives = 134/152 (88%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVG
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGI 465
+FAE+ K+DRR+GK E PK +K+GDAG+
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGM 389
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 251 bits (615), Expect = 2e-67
Identities = 112/152 (73%), Positives = 134/152 (88%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVG
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGI 465
+FAE+ K+DRR+GK E PK +K+GDAG+
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGM 389
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 251 bits (615), Expect = 2e-67
Identities = 112/152 (73%), Positives = 134/152 (88%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 189
LQDVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVG
Sbjct: 238 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVG 297
Query: 190 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
FNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGI 465
+FAE+ K+DRR+GK E PK +K+GDAG+
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGM 389
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 195
D YK +GTV +G++E+G + G ++ P +V SV + ++ A PG+NV
Sbjct: 189 DKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVK 246
Query: 196 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 369
+ + ++ G+V K NP ++F AQ+ +L + GY VL H+
Sbjct: 247 LSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEE 305
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIK 447
+ E+ E++D + K + K K
Sbjct: 306 CEIVELIEEIDLKRRKEGDIKKKKSK 331
>02_04_0462 + 23131433-23132836
Length = 467
Score = 58.8 bits (136), Expect = 2e-09
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGDN 183
++DV+ I G GTV GR+E G +K G V T V VEM + + +A+ GDN
Sbjct: 283 VEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDN 342
Query: 184 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYTPVLDCH 354
VG ++ + ++ RG V + P D V+ + G+ S GY P
Sbjct: 343 VGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYRPQFYMR 402
Query: 355 TAHIAWQFAEIKEKVD 402
T + +I D
Sbjct: 403 TTDVTGNVTKIMNDKD 418
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 58.4 bits (135), Expect = 3e-09
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 16 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 195
D YK +GTV +G++E+G ++ G ++ P +V + + ++ A P +NV
Sbjct: 234 DKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVK 291
Query: 196 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 369
+ + +++ G+V S NP +F AQ+ +L + GY VL H+
Sbjct: 292 LSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEE 350
Query: 370 WQFAEIKEKVDRRTGKSTEDNPKSIK 447
+ ++ E++D + K E +PK K
Sbjct: 351 CEIVDLIEEIDMK--KKKEADPKKKK 374
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 53.2 bits (122), Expect = 1e-07
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Frame = +1
Query: 10 LQDVYKIGGIGTVPVGRVETGILKPG---TVVVFAPAN-ITTEVKSVEMHHEALQEAVPG 177
++DV+ I G GTV GRVE G +K G ++ P+ + T V VEM + L G
Sbjct: 272 IEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAG 331
Query: 178 DNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL------NHPGQISNGYTP 339
DNVG ++ + +++RG V K + F A++ VL H +SN Y+P
Sbjct: 332 DNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTKDEGGRHTAFLSN-YSP 388
Query: 340 VLDCHTAHI 366
TA +
Sbjct: 389 QFYFRTADV 397
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 46.4 bits (105), Expect = 1e-05
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Frame = +1
Query: 16 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 192
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 193 NVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAH 363
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 364 IAWQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGIGQ 471
A + +I +D + GK ++ P+ +KS + Q
Sbjct: 602 EAARVTKIVALLD-KAGKPSKTAPRFLKSKQNAVVQ 636
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 46.4 bits (105), Expect = 1e-05
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Frame = +1
Query: 16 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 192
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 193 NVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAH 363
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 364 IAWQFAEIKEKVDRRTGKSTEDNPKSIKSGDAGIGQ 471
A + +I +D + GK ++ P+ +KS + Q
Sbjct: 602 EAARVTKIVALLD-KAGKPSKTAPRFLKSKQNAVVQ 636
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 380 PKSKRKSTVVLVNQQRTTLNPLNLVMPALVNLGSLQAP 493
P+ R+S + Q TT++P NLV+P ++ G AP
Sbjct: 103 PRRNRRSPALRAAFQETTISPANLVLPLFIHEGEDDAP 140
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 30.3 bits (65), Expect = 0.88
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 52 VGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 231
+G + + P T+V +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 232 YVAGDS---KNNPPRGAADFTAQVIVLNH 309
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 285 SASHCAKS--PRSNIKRIHTCIGLPHSP-HSLA 374
S+S CA + P NI RIH IGL SP H LA
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHLLA 128
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 136 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 315
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 316 QISNG 330
+I G
Sbjct: 170 EIRRG 174
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 458 ASPDLMDLGLSSVDLPVRRSTFSL 387
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 75 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 176
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 293 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 150
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 46 VPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF-NVKNVSV 213
VPVG + + PG V ++ T + + + HH +++ + VG NV +V V
Sbjct: 161 VPVGEADGPLRLPGLPVELDAGDVPTFLAAHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 223 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 333
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544
Length = 360
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 434 LNPLNLVMPALVNLGSLQAP 493
L+PLNLV+P + L SL AP
Sbjct: 4 LSPLNLVLPLAILLSSLLAP 23
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 71 PVSTLPTGTVPIPPILYTS 15
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.135 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,316,201
Number of Sequences: 37544
Number of extensions: 332586
Number of successful extensions: 724
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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