Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L14
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p pro...    27   7.1  
AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB...    27   7.1  
AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA...    27   7.1  

>AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p
           protein.
          Length = 926

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 245 KQYTPLVLLAT*QHNYIMHSLRIFRYNI 162
           K Y PL +L T + NY++H+L  F Y++
Sbjct: 96  KSYRPLTVL-TFRFNYLLHALEPFGYHL 122


>AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB,
           isoform B protein.
          Length = 926

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 245 KQYTPLVLLAT*QHNYIMHSLRIFRYNI 162
           K Y PL +L T + NY++H+L  F Y++
Sbjct: 96  KSYRPLTVL-TFRFNYLLHALEPFGYHL 122


>AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA,
           isoform A protein.
          Length = 926

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 245 KQYTPLVLLAT*QHNYIMHSLRIFRYNI 162
           K Y PL +L T + NY++H+L  F Y++
Sbjct: 96  KSYRPLTVL-TFRFNYLLHALEPFGYHL 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,434,956
Number of Sequences: 53049
Number of extensions: 295476
Number of successful extensions: 363
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)