Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L10
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    64   8e-13
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   1.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.0  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    21   7.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.2  

>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 64.5 bits (150), Expect = 8e-13
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +2

Query: 197 FTLLVGCSPFWHRKQMVMLRNIMEGKYSFTSPEWADISDDPKDLIRRLLVVEPSERIDIL 376
           + LLVG  PFW   Q  +   I  G Y + SPEW  ++ + K+LI ++L V PS+RI   
Sbjct: 103 YILLVGYPPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 162

Query: 377 DALGHPF 397
           +AL HP+
Sbjct: 163 EALKHPW 169



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 153 YGMEVDNWAFGII 191
           YG  VD WA G+I
Sbjct: 89  YGKPVDIWACGVI 101


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 80  NCAALQRYLAPGNALSEYVR*RTRIW 157
           N   L +Y  PGN L+ Y +    IW
Sbjct: 175 NSIILDQYTNPGNPLAHYDQTAIEIW 200


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 153 YGMEVDNWAFGIIHGLHCWWDVRL 224
           Y   VD +AFGI+    C   VRL
Sbjct: 770 YDSSVDVYAFGILFWYLCAGHVRL 793


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 153 YGMEVDNWAFGIIHGLHCWWDVRL 224
           Y   VD +AFGI+    C   VRL
Sbjct: 808 YDSSVDVYAFGILFWYLCAGHVRL 831


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 301 RPLGTGERIFPFHYIPQHHHLLTVPKRRTSHQQCKPWII 185
           +P+    RIF       HH L+ +P+      +   W++
Sbjct: 510 KPMKAAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWML 548


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -1

Query: 301 RPLGTGERIFPFHYIPQHHHLLTVPKRRTSHQQCKPWII 185
           +P+    RIF       HH L+ +P+      +   W++
Sbjct: 510 KPMKAAIRIFIGPKYDSHHKLIEIPEDLKYFYEIDNWML 548


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 18/74 (24%), Positives = 27/74 (36%)
 Frame = +1

Query: 58  SARGQLFELCGTXXXXXXXXXXXXXCSMTHPDMEWKSIIGHSELSMVYIVGGMFAFLAP* 237
           +A   +F   G               S+  P++  KSII      ++ I G + A L   
Sbjct: 18  AASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA- 76

Query: 238 ADGDAEEYNGREIF 279
             G  EE  G  +F
Sbjct: 77  --GGLEEPKGYTLF 88


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 194 WFTLLVGCSPFWHRKQMVMLRNIMEGKY 277
           W   L GC  ++      +L N+M  KY
Sbjct: 296 WVYPLTGCLYYFSTTINPILYNVMSAKY 323


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 341 LVVEPSERIDILDALGHPFF 400
           + +E  ER+  LD  GH  F
Sbjct: 187 VTLESGERVTFLDTPGHAAF 206


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,974
Number of Sequences: 438
Number of extensions: 3916
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)