Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L09
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z66522-1|CAA91406.3|  425|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical
           protein ZK1321.2f protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 388 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 416


>Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK1321.2e protein.
          Length = 448

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 401 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 429


>Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical
           protein ZK1321.2d protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 454 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 482


>Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK1321.2c protein.
          Length = 536

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 489 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 517


>Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical
           protein ZK1321.2b protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 477 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 505


>Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical
           protein ZK1321.2a protein.
          Length = 481

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 34  GGANAFVLVLKLLRPVPFILNTSKIYYRE 120
           GG  A + VL L  PVP I+   K +YR+
Sbjct: 434 GGMCAMIGVLTLALPVPIIVANFKHFYRQ 462


>Z66522-1|CAA91406.3|  425|Caenorhabditis elegans Hypothetical
           protein F14E5.3 protein.
          Length = 425

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 414 SRMFLRYKFGNHVEYMLDQFVNLQKVHQKEVMTIVFKI 301
           +R  ++ +FG  V  +L+  VN  K H   + ++ FK+
Sbjct: 282 NRKMIKARFGFLVHTLLENLVNAWKHHLARIKSLKFKV 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,627,544
Number of Sequences: 27780
Number of extensions: 161169
Number of successful extensions: 330
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)