Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L08
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.1  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   8.1  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 358  IGTRSEGGAGDGEDISRSESW 420
            +GT ++G   +G  +S S+SW
Sbjct: 1023 VGTPTDGAPSEGRRLSHSKSW 1043


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 499 GNQPPVQTLRHRQLI 455
           GN+ P+Q +RHRQ +
Sbjct: 60  GNRLPIQRIRHRQTL 74


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 296  PGEGESAAGEETRARVARW*ASERGAR 376
            P   E+A  E+ R RVARW   +R  R
Sbjct: 1138 PTPREAARLEDGRRRVARWRERQRMIR 1164


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 43  EPPLVYASCRFPAA 2
           + P+VYASC+  AA
Sbjct: 113 QQPIVYASCKLQAA 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,401
Number of Sequences: 2352
Number of extensions: 11971
Number of successful extensions: 85
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)