Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L08
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89355-1|AAC51340.1|  932|Homo sapiens CREB-binding protein prot...    31   3.4  
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot...    31   3.4  
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot...    31   3.4  
AC004760-1|AAC17736.1|  923|Homo sapiens CBP protein.                  31   3.4  
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ...    31   3.4  
U86078-1|AAC51872.1|  536|Homo sapiens calmodulin-stimulated pho...    31   4.5  
U86077-1|AAC51871.1|   71|Homo sapiens calmodulin-stimulated pho...    31   4.5  
U56976-1|AAC50769.1|  536|Homo sapiens calmodulin dependent phos...    31   4.5  
U40584-1|AAB50018.1|  184|Homo sapiens calcium/calmodulin-stimul...    31   4.5  
M94539-1|AAA58405.1|  116|Homo sapiens cyclic nucleotide phospho...    31   4.5  
BX538092-1|CAD98011.1|  399|Homo sapiens hypothetical protein pr...    31   4.5  
BC032226-1|AAH32226.1|  536|Homo sapiens phosphodiesterase 1B, c...    31   4.5  
AK124580-1|BAC85891.1|  179|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AJ401609-1|CAC82207.1|  516|Homo sapiens 3'5' cyclic nucleotide ...    31   4.5  
BC093026-1|AAH93026.1|  295|Homo sapiens phospholipid scramblase...    30   7.9  
BC011735-1|AAH11735.1|  295|Homo sapiens phospholipid scramblase...    30   7.9  
AK075188-1|BAC11458.1|  295|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AF159442-1|AAF91083.1|  295|Homo sapiens phospholipid scramblase...    30   7.9  

>U89355-1|AAC51340.1|  932|Homo sapiens CREB-binding protein
           protein.
          Length = 932

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 441 EPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPTTSAYNGHL 262
           +P + PQPGL+++         + P+   H + +L  +++  A  P PGVP      G L
Sbjct: 602 QPGMQPQPGLQSQ-------PGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGL 654


>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
          Length = 2442

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 441  EPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPTTSAYNGHL 262
            +P + PQPGL+++         + P+   H + +L  +++  A  P PGVP      G L
Sbjct: 2112 QPGMQPQPGLQSQ-------PGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGL 2164


>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
          Length = 2442

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 441  EPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPTTSAYNGHL 262
            +P + PQPGL+++         + P+   H + +L  +++  A  P PGVP      G L
Sbjct: 2112 QPGMQPQPGLQSQ-------PGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGL 2164


>AC004760-1|AAC17736.1|  923|Homo sapiens CBP protein.
          Length = 923

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 441 EPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPTTSAYNGHL 262
           +P + PQPGL+++         + P+   H + +L  +++  A  P PGVP      G L
Sbjct: 593 QPGMQPQPGLQSQ-------PGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGL 645


>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
            protein.
          Length = 2472

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -3

Query: 441  EPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPTTSAYNGHL 262
            +P + PQPGL+++         + P+   H + +L  +++  A  P PGVP      G L
Sbjct: 2142 QPGMQPQPGLQSQ-------PGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGL 2194


>U86078-1|AAC51872.1|  536|Homo sapiens calmodulin-stimulated
           phosphodiesterase PDE1B1 protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 245 VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 275


>U86077-1|AAC51871.1|   71|Homo sapiens calmodulin-stimulated
           phosphodiesterase PDE1B1 protein.
          Length = 71

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 24  VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 54


>U56976-1|AAC50769.1|  536|Homo sapiens calmodulin dependent
           phosphodiesterase PDE1B1 protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 245 VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 275


>U40584-1|AAB50018.1|  184|Homo sapiens
           calcium/calmodulin-stimulated cyclic nucleotide
           phosphodiesterase protein.
          Length = 184

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 45  VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 75


>M94539-1|AAA58405.1|  116|Homo sapiens cyclic nucleotide
           phosphodiesterase protein.
          Length = 116

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 24  VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 54


>BX538092-1|CAD98011.1|  399|Homo sapiens hypothetical protein
           protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 108 VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 138


>BC032226-1|AAH32226.1|  536|Homo sapiens phosphodiesterase 1B,
           calmodulin-dependent protein.
          Length = 536

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 245 VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 275


>AK124580-1|BAC85891.1|  179|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42589 fis, clone BRACE3009701. ).
          Length = 179

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -1

Query: 86  GSSNPLCPSVLL--PXGATTGVCLVPIPCS 3
           GS + L P  LL  P     GVCL+PIPCS
Sbjct: 150 GSPDSLLPWALLRSPFIVAFGVCLMPIPCS 179


>AJ401609-1|CAC82207.1|  516|Homo sapiens 3'5' cyclic nucleotide
           phosphodiesterase 1B2 protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 540 LHCSSK-PILIFVATATSHQYRHSDTVNSYH 451
           +HC S+  +L  +  A  H Y H+ T NS+H
Sbjct: 225 VHCLSEIELLAIIFAAAIHDYEHTGTTNSFH 255


>BC093026-1|AAH93026.1|  295|Homo sapiens phospholipid scramblase 3
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -3

Query: 450 GLPEPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPT 286
           G PEP LHP PG   +   P    A AP            + S A   P PGVP+
Sbjct: 23  GYPEPALHPGPG---QAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPS 74


>BC011735-1|AAH11735.1|  295|Homo sapiens phospholipid scramblase 3
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -3

Query: 450 GLPEPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPT 286
           G PEP LHP PG   +   P    A AP            + S A   P PGVP+
Sbjct: 23  GYPEPALHPGPG---QAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPS 74


>AK075188-1|BAC11458.1|  295|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90707 fis, clone PLACE1007702, weakly similar to
           Mus musculus TRA1 mRNA. ).
          Length = 295

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -3

Query: 450 GLPEPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPT 286
           G PEP LHP PG   +   P    A AP            + S A   P PGVP+
Sbjct: 23  GYPEPALHPGPG---QAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPS 74


>AF159442-1|AAF91083.1|  295|Homo sapiens phospholipid scramblase 3
           protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 7.9
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -3

Query: 450 GLPEPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSPGVPT 286
           G PEP LHP PG   +   P    A AP            + S A   P PGVP+
Sbjct: 23  GYPEPALHPGPG---QAPVPAQVPAPAPGFALFPSPGPVALGSAAPFLPLPGVPS 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,515,577
Number of Sequences: 237096
Number of extensions: 1837716
Number of successful extensions: 13767
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13749
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)