Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L08
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p pro...    30   2.3  
AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-P...    30   3.0  
AE014296-2306|AAF49797.1|  266|Drosophila melanogaster CG8757-PA...    28   9.2  

>AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p
           protein.
          Length = 576

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 163 ESEHHRSPTCRPLDTAPWRAPDLRDAVQAIPYVHRSCFH 47
           +S H ++PT  P  T PW+   L+D  +     +RSCF+
Sbjct: 491 DSNHSKNPTTPPRSTDPWKQV-LQDRDRFRANCNRSCFY 528


>AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-PA
           protein.
          Length = 575

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 163 ESEHHRSPTCRPLDTAPWRAPDLRDAVQAIPYVHRSCFH 47
           +S H ++PT  P  T PW+   L+D  +     +RSCF+
Sbjct: 490 DSNHTKNPTTPPRSTDPWKQV-LQDRDRFRANCNRSCFY 527


>AE014296-2306|AAF49797.1|  266|Drosophila melanogaster CG8757-PA
           protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -3

Query: 477 HSDTVNSYHGLPEPELHPQPGLRARNVFPVACTALAPRSDAHHRATLARVSSPAADSPSP 298
           H   VNS  G   P L PQ  L + N++P    AL   ++ + +      ++    + SP
Sbjct: 153 HVVIVNSVAGYQVPNLGPQ--LPSLNIYPATKFALRAMNEIYRQEFQRHKTAVRVSTVSP 210

Query: 297 GVPTT 283
           G+  T
Sbjct: 211 GIVDT 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,553,407
Number of Sequences: 53049
Number of extensions: 542727
Number of successful extensions: 1878
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)