Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_L06
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    35   0.002
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    28   0.26 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   2.4  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   4.2  

>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
 Frame = +3

Query: 162 FLKKFPAGKVPAFESADGKVLLTESNAIAYYVA-------NDDLRGGDLATQARVLQWAS 320
           FLK  P   +P    ADG V++ ES+AI  Y+A       +D L   D+A +A+V Q   
Sbjct: 46  FLKLNPQHYIPTLVDADGDVVVWESSAILIYLAERYGAADDDTLYPKDIALRAKVNQRLF 105

Query: 321 WADSELLPASCAWVFPYLGIMQFNKQNVERAKNXXXXXXXXXXXXXXSRTFLVTERITLA 500
           +    L+ +   +  P   I+   +  +E  K               SR +   + IT+A
Sbjct: 106 YDIGTLMRSVTTYYHP---ILMGGEGKLEDFKKVQDAVGVLDSFLSASR-WTAGDHITVA 161

Query: 501 DIIVYSTL 524
           D  +  T+
Sbjct: 162 DFAIAVTV 169


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 144 TNKTENFLKKFPAGKVPAFESADGK--VLLTESNAIAYYV 257
           + K E +L+K P GKVPA E   GK  V L ES  ++ Y+
Sbjct: 55  SEKPEWYLEKNPLGKVPALE-IPGKEGVTLYESLVLSDYI 93


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 307 CNGPHGLTVNCCRHPAHGS 363
           C GPH +    C HPA  S
Sbjct: 522 CGGPHRIGHMSCEHPASRS 540


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 307 CNGPHGLTVNCCRHPAHGSFH 369
           CNGPH +    C  PA    H
Sbjct: 435 CNGPHRIGHISCARPAARCLH 455


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,881
Number of Sequences: 2352
Number of extensions: 15666
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)