Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L06
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 58 7e-10
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical ... 31 0.80
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 29 1.9
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 29 3.2
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.2
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 27 7.5
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 27 7.5
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 27 7.5
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 27 7.5
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 27 9.9
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 94.7 bits (225), Expect = 4e-20
Identities = 64/184 (34%), Positives = 89/184 (48%)
Frame = +3
Query: 36 GVLYTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADG 215
G LY +NFR K LIAA+ + V +A D + KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---G 50
Query: 216 KVLLTESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNK 395
LL + +I ++ + A +QW +A+ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGT-------SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 396 QNVERAKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVRSKLV 575
+ VE+ KN +T+LV ER++LAD+ V LL AFQ+VLD R +V
Sbjct: 104 KTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIV 163
Query: 576 NVQR 587
NV R
Sbjct: 164 NVTR 167
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 75.4 bits (177), Expect = 3e-14
Identities = 41/119 (34%), Positives = 61/119 (51%)
Frame = +3
Query: 231 ESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQNVER 410
E +A+ + + L + A +QW +A+ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 411 AKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVRSKLVNVQR 587
KN +T+LV ER++LAD+ V LL AFQ+VLD R +VNV R
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTR 142
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 58.4 bits (135), Expect(2) = 7e-10
Identities = 42/128 (32%), Positives = 60/128 (46%)
Frame = +3
Query: 36 GVLYTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADG 215
G LY +NFR K LIAA+ + V +A D + KFP G PAFE G
Sbjct: 3 GKLYGNKDNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---G 50
Query: 216 KVLLTESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNK 395
LL + +I ++ + A +QW +A+ LLPA +V P + F+K
Sbjct: 51 DALLFGAESIGLHLTGT-------SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDK 103
Query: 396 QNVERAKN 419
+ VE+ KN
Sbjct: 104 KTVEQYKN 111
Score = 22.2 bits (45), Expect(2) = 7e-10
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 537 QHVLDPTVRSKLVNVQR 587
Q+VLD R +VNV R
Sbjct: 118 QYVLDANARKSIVNVTR 134
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.61
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +3
Query: 54 PENFRAYKALI--AAQYS--GANVKVAPDFVFGET--NKTENFLKKFPAGKVPAFESADG 215
P FR Y AAQ + A+VK P V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 216 KVLLTESNAIAYYVANDDL 272
K L+ ES I Y+ DD+
Sbjct: 84 KKLVIESAVIPEYL--DDI 100
>AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical
protein Y7A5A.8 protein.
Length = 157
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 560 YSRIQHMLESMQQRAVDDNICKSNPLRDQESAAQKMSIQKL 438
+S QH+L+ +RA+ ++ ++QE+ AQK+ I+KL
Sbjct: 67 FSNQQHLLQDKPKRAMAQGEHGNDASKEQEAKAQKVEIKKL 107
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 117 LSRSPRNIVRRSTPCKRGNFLDKYKVPRQPWFDPFG 10
LSR+P + + +T K G D K+ QP F P G
Sbjct: 259 LSRTPFHFKKEATDDKAGKVKDMLKIDMQPVFTPAG 294
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 150 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 272
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 100
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 150 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 272
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 383
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 YPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTEN-FLKKFPAGKVPAFESADGKVLL 227
Y F Y + + N+ V + V +++ N +L K P G+VPA E +GKV +
Sbjct: 102 YSMRFCPYAQRVLIYLAKKNIPV--EVVNVNPDRSPNWYLPKSPIGRVPALE-INGKV-V 157
Query: 228 TESNAIAYYV 257
ESN I Y+
Sbjct: 158 WESNVIVEYL 167
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 18 DQTMAAGVLYTYPENFRAYKALIAA 92
+ +MA+G ++ PEN R Y A+I A
Sbjct: 367 EASMASGKMFGKPENIRTYGAMIRA 391
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 18 DQTMAAGVLYTYPENFRAYKALIAA 92
+ +MA+G ++ PEN R Y A+I A
Sbjct: 367 EASMASGKMFGKPENIRTYGAMIRA 391
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 18 DQTMAAGVLYTYPENFRAYKALIAA 92
+ +MA+G ++ PEN R Y A+I A
Sbjct: 367 EASMASGKMFGKPENIRTYGAMIRA 391
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 68 RLQGVDRRTIFRGERESSPRF 130
++ G D + I++GERESS +F
Sbjct: 58 KITGPDNKEIYKGERESSGKF 78
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 183 GKVPAFESADGKVLLTES--NAIAYYVANDDLRGGDLAT 293
G + A E D K+ L S N I Y++ N D D+AT
Sbjct: 275 GCISANEQGDNKIQLGYSFINEIPYFICNTDFCNYDIAT 313
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 463 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 365
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 463 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 365
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 463 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 365
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 463 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 365
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,005,843
Number of Sequences: 27780
Number of extensions: 334056
Number of successful extensions: 894
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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