Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_L04
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.016
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.016
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.016
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.016
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 31 0.44
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 2.4
AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical... 29 2.4
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 29 2.4
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 5.5
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 27 7.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 27 7.2
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 27 7.2
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 27 7.2
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 27 7.2
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 27 7.2
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 27 7.2
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 27 7.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 PEETKPKPDDKVIADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXV--PSKSKDTP 510
P + + P+ V+ + K+P+ KS E K D P V P+K + +P
Sbjct: 1601 PTKKEKSPEKSVVEELKSPKEKSPE-KADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSP 1659
Query: 511 AKVNEVPTEVSEKSAS 558
KV E PT ++K +S
Sbjct: 1660 EKVEEKPTSPTKKESS 1675
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 PEETKPKPDDKVIADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXV--PSKSKDTP 510
P + + P+ V+ + K+P+ KS E K D P V P+K + +P
Sbjct: 1601 PTKKEKSPEKSVVEELKSPKEKSPE-KADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSP 1659
Query: 511 AKVNEVPTEVSEKSAS 558
KV E PT ++K +S
Sbjct: 1660 EKVEEKPTSPTKKESS 1675
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 PEETKPKPDDKVIADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXV--PSKSKDTP 510
P + + P+ V+ + K+P+ KS E K D P V P+K + +P
Sbjct: 1601 PTKKEKSPEKSVVEELKSPKEKSPE-KADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSP 1659
Query: 511 AKVNEVPTEVSEKSAS 558
KV E PT ++K +S
Sbjct: 1660 EKVEEKPTSPTKKESS 1675
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 337 PEETKPKPDDKVIADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXV--PSKSKDTP 510
P + + P+ V+ + K+P+ KS E K D P V P+K + +P
Sbjct: 1601 PTKKEKSPEKSVVEELKSPKEKSPE-KADDKPKSPTKKEKSPEKSATEDVKSPTKKEKSP 1659
Query: 511 AKVNEVPTEVSEKSAS 558
KV E PT ++K +S
Sbjct: 1660 EKVEEKPTSPTKKESS 1675
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 336 VFGLSFCWCFFTFGLRYFF--FSFWSRIGFLFLFRNGMLCFSGFCVSYRSRLSNQFLFFI 163
V + + +C F+F + +FF FS WS + L + C FC Y+ L N + FF+
Sbjct: 276 VLHIHYIFCIFSFFINFFFLIFSIWSLVSPGSLTFTPINCLLIFCFLYQLPL-NIWGFFV 334
Query: 162 SDRLRN 145
R+
Sbjct: 335 VKSCRD 340
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 340 EETKPKPDDKVIADEKTPEPKSAEPKP 420
EE K + ++ DEK EPK EPKP
Sbjct: 199 EEKKEEKKEEKKEDEKKVEPKPGEPKP 225
>AC024214-15|AAM97983.1| 544|Caenorhabditis elegans Hypothetical
protein Y77E11A.12a protein.
Length = 544
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -1
Query: 369 FIIWFWFCLFRVFGLSFC--WCFFTFGLRYFFFSF 271
F+ +W C +F C W F G+R FF ++
Sbjct: 225 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTY 259
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -1
Query: 369 FIIWFWFCLFRVFGLSFC--WCFFTFGLRYFFFSF 271
F+ +W C +F C W F G+R FF ++
Sbjct: 325 FLTVYWTCWTLLFAFGTCIGWTFLAIGIRLFFTTY 359
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 349 KPKPDDKVIADEKTPEPKSAEPKPTD 426
K KPDDK ++ EP +++P P+D
Sbjct: 351 KTKPDDKPYEIPRSIEPSNSKPYPSD 376
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 349 KPKPDDKVIADEKTPEPKSAEPKPTD 426
K KPDDK ++ EP +++P P+D
Sbjct: 676 KTKPDDKPYEIPRSIEPSNSKPYPSD 701
>Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical
protein R03G8.3 protein.
Length = 654
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 222 FSGFCVSYRSRLSNQFLFFISDR-LRNSHSRK 130
F F + +R +L N F+FF+ D LR + RK
Sbjct: 394 FHKFLIKHREQLDNSFVFFMGDHGLRFGNVRK 425
>Z68298-7|CAA92604.1| 447|Caenorhabditis elegans Hypothetical
protein F44D12.8 protein.
Length = 447
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 349 KPKPDDKVIADEKTPEPKSAEPKPT 423
K KP ++ KTP P + P PT
Sbjct: 31 KSKPQPTIVPPRKTPSPSTVTPLPT 55
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 340 EETKPKPDDKVIADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTP 510
E KPK KV A + P PK A P+ PA +P+ +++ P
Sbjct: 921 EPEKPKDAPKVAAKPRDPSPKKAVPEKE--PAKVAAKPRDLSPKKAIPIPANTQEAP 975
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 37 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 71
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1
Query: 355 KPDDKVIADEKTPEPKSAE 411
+P+DKV + E+TPEP +++
Sbjct: 619 EPEDKVTSSEQTPEPTTSQ 637
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1
Query: 355 KPDDKVIADEKTPEPKSAE 411
+P+DKV + E+TPEP +++
Sbjct: 619 EPEDKVTSSEQTPEPTTSQ 637
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 124 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 222
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 337 PEETKPKPDDKVIADEKTPEPKSAEPKPTDVP 432
P P P++ E T K+A P PT VP
Sbjct: 231 PAPNPPAPENTTAKVETTKPTKAAPPAPTPVP 262
>U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical
protein F47B3.5 protein.
Length = 199
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 340 EETKPKPDDKVIADEKTPEPKSAEPKPTDV 429
EE+K K K D+K+ +PK + K DV
Sbjct: 28 EESKDKEKSKKSEDKKSEDPKKEDAKKPDV 57
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 340 EETKPKPDDKVIADEKTPEPKSAEPKPTDV 429
EE+K K K D+K+ +PK + K DV
Sbjct: 110 EESKDKEKSKKSEDKKSEDPKKEDAKKPDV 139
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 352 PKPDDKVIADEKTPEPKSAEPKPTDVP 432
PKP D +A + + S PKP +VP
Sbjct: 19 PKPKDPKLASKAPAKKPSETPKPKEVP 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.126 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,511,112
Number of Sequences: 27780
Number of extensions: 193820
Number of successful extensions: 671
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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