Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K18
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 28 0.056
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 0.69
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 2.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 6.4
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 6.4
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 21 6.4
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 6.4
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 8.5
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 8.5
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 8.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.5
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 27.9 bits (59), Expect = 0.056
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 340 GSRSTAPGTSSPPSVRTGTSGTQTSYLCLFP 248
G+ +TA T +PPSV G++ T+ LFP
Sbjct: 43 GTSTTAAATPTPPSVPVGSAVAGTAGGALFP 73
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.2 bits (50), Expect = 0.69
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 349 CGCGSRSTAPGTSSPPSVRTGTSG 278
C C PG+SS V TG SG
Sbjct: 13 CWCCDNLGGPGSSSAGGVVTGASG 36
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -2
Query: 420 PEEGHRRRDADHRVQQRDAPLRVHADAVLVVQPQG 316
P+ +R+D +H+ ++ L V+A+A + ++ G
Sbjct: 62 PQPISKRKDKEHKKKKSKTILAVNAEADITLKNAG 96
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -2
Query: 420 PEEGHRRRDADHRVQQRDAPLRVHADAVLVVQPQG 316
P+ +R+D +H+ ++ L V+A+A + ++ G
Sbjct: 62 PQPISKRKDKEHKKKKSKTILAVNAEADITLKNAG 96
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 124 KDHRVVRFLNSSMTSVG 74
K HRV + SSM SVG
Sbjct: 191 KFHRVCTQIGSSMKSVG 207
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 321 QGLRRRRQYERVLQERKLLTSAY 253
QG+R ++ E +L E K T+ +
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTRF 137
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 321 QGLRRRRQYERVLQERKLLTSAY 253
QG+R ++ E +L E K T+ +
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTRF 137
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 321 QGLRRRRQYERVLQERKLLTSAY 253
QG+R ++ E +L E K T+ +
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTRF 137
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 49 LENVLGHLYPPTSLKSSKTSQPDDPLAVE 135
L+ VL LYPP L+ P+A +
Sbjct: 87 LQLVLAALYPPNKLQQWNEDLNWQPIATK 115
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 49 LENVLGHLYPPTSLKSSKTSQPDDPLAVE 135
L+ VL LYPP L+ P+A +
Sbjct: 102 LQLVLAALYPPNKLQQWNEDLNWQPIATK 130
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 440 CLRRTLSLRKGIGGA 396
C RRT +LR+G G+
Sbjct: 82 CKRRTNTLRRGSDGS 96
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 440 CLRRTLSLRKGIGGA 396
C RRT +LR+G G+
Sbjct: 530 CKRRTNTLRRGSDGS 544
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,840
Number of Sequences: 438
Number of extensions: 2403
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -