Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K17
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 109 1e-24
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 109 1e-24
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 44 5e-05
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 37 0.010
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 33 0.095
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 33 0.095
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 33 0.095
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 33 0.095
U29097-4|AAM98031.1| 308|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 1.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 1.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 1.5
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 27 6.2
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 27 6.2
U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 27 8.2
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 27 8.2
U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 27 8.2
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 27 8.2
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 109 bits (262), Expect = 1e-24
Identities = 61/174 (35%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +3
Query: 9 GNSAAD---RVTLAGRGLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAA 179
G++A D R+ + G GL A + F ID +I V +
Sbjct: 1966 GSNADDEISRIMVRGDGLHRAVLKEHNEFIIDGSDINKEGRITATLLGSKADIPVRIQQL 2025
Query: 180 GPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXX 359
G +++A YTP G ++L +LW G+ VKG P V + D
Sbjct: 2026 GHNVYKATYTPLTGGTYELHILWNGKHVKGSPFAVSADTSAHLADL--IDVDASTLKIGI 2083
Query: 360 XXREIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRH 521
I++ IDTR AG G+L+A C GPNK AYCELY+H DGT+ L V+PAE G+H
Sbjct: 2084 INENIKTLIDTRRAGSGQLSALCMGPNKPAYCELYDHRDGTYALCVRPAEIGKH 2137
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +3
Query: 36 LAGRGLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPK 215
L+G GL A A F I D + + G + A Y +
Sbjct: 72 LSGPGLVRAPVNRTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSGKYTAEYEIE 131
Query: 216 RSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
+ G+H L V AGR V G PL+V V+ G
Sbjct: 132 QVGEHHLTVWIAGRKVDGSPLSVAVNQG 159
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +3
Query: 54 AHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPKRSGDHQ 233
A+A PA F ID D N+ + A G ++ +TP+ + DH
Sbjct: 1428 ANAVVGKPATFVIDAARSGAGNMEIIVSV-DNRNVPNFVQAEGQARFKVSFTPQDAKDHT 1486
Query: 234 LRVLWAGRLVKGCPLTVKVS 293
+ V + G V G PL VS
Sbjct: 1487 ISVKFNGISVPGSPLICSVS 1506
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKV 290
Y PK GD+Q+ V W G V G P V +
Sbjct: 2226 YEPKEPGDYQVEVKWHGEHVPGSPFLVMI 2254
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 183 PGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVK 287
PG + +TP + GDH++ V + G V G P T +
Sbjct: 1201 PGHMQINFTPAQVGDHEIDVRYGGVPVTGSPFTCR 1235
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/112 (25%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Frame = +3
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXX 365
G + P G H L + + VKG P V VS + R
Sbjct: 2123 GTYALCVRPAEIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKV-RVYGPGVEHGILSLF 2181
Query: 366 REIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVK--PAEAG 515
+ ++TR AG G+LT GP E+ T++ K P E G
Sbjct: 2182 KS-NFVVETRGAGAGQLTVRVRGPKGAFNVEMQREKKNERTIHCKYEPKEPG 2232
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 198 ALYTPKRSGDHQLRVLWAGRLVKGCPLTVK 287
A Y PK G+H + + G + G P T K
Sbjct: 1386 ATYVPKCVGNHLIDIFLQGEPIAGSPFTAK 1415
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 109 bits (262), Expect = 1e-24
Identities = 61/174 (35%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Frame = +3
Query: 9 GNSAAD---RVTLAGRGLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAA 179
G++A D R+ + G GL A + F ID +I V +
Sbjct: 2384 GSNADDEISRIMVRGDGLHRAVLKEHNEFIIDGSDINKEGRITATLLGSKADIPVRIQQL 2443
Query: 180 GPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXX 359
G +++A YTP G ++L +LW G+ VKG P V + D
Sbjct: 2444 GHNVYKATYTPLTGGTYELHILWNGKHVKGSPFAVSADTSAHLADL--IDVDASTLKIGI 2501
Query: 360 XXREIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRH 521
I++ IDTR AG G+L+A C GPNK AYCELY+H DGT+ L V+PAE G+H
Sbjct: 2502 INENIKTLIDTRRAGSGQLSALCMGPNKPAYCELYDHRDGTYALCVRPAEIGKH 2555
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 144 DGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKV 290
D E+ V + LW A++TPK G+H+L +L AG + G P + V
Sbjct: 1765 DREDNEVFVKKVSETLWSAVWTPKVEGEHELSILVAGEQIPGSPFPIHV 1813
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/88 (29%), Positives = 35/88 (39%)
Frame = +3
Query: 36 LAGRGLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPK 215
L+G GL A A F I D + + G + A Y +
Sbjct: 72 LSGPGLVRAPVNRTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSGKYTAEYEIE 131
Query: 216 RSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
+ G+H L V AGR V G PL+V V+ G
Sbjct: 132 QVGEHHLTVWIAGRKVDGSPLSVAVNQG 159
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +3
Query: 54 AHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPKRSGDHQ 233
A+A PA F ID D N+ + A G ++ +TP+ + DH
Sbjct: 1428 ANAVVGKPATFVIDAARSGAGNMEIIVSV-DNRNVPNFVQAEGQARFKVSFTPQDAKDHT 1486
Query: 234 LRVLWAGRLVKGCPLTVKVS 293
+ V + G V G PL VS
Sbjct: 1487 ISVKFNGISVPGSPLICSVS 1506
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKV 290
Y PK GD+Q+ V W G V G P V +
Sbjct: 2644 YEPKEPGDYQVEVKWHGEHVPGSPFLVMI 2672
Score = 30.7 bits (66), Expect = 0.67
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 183 PGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVK 287
PG + +TP + GDH++ V + G V G P T +
Sbjct: 1201 PGHMQINFTPAQVGDHEIDVRYGGVPVTGSPFTCR 1235
Score = 29.1 bits (62), Expect = 2.0
Identities = 28/112 (25%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Frame = +3
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXX 365
G + P G H L + + VKG P V VS + R
Sbjct: 2541 GTYALCVRPAEIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKV-RVYGPGVEHGILSLF 2599
Query: 366 REIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVK--PAEAG 515
+ ++TR AG G+LT GP E+ T++ K P E G
Sbjct: 2600 KS-NFVVETRGAGAGQLTVRVRGPKGAFNVEMQREKKNERTIHCKYEPKEPG 2650
Score = 28.3 bits (60), Expect = 3.6
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Frame = +3
Query: 48 GLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPKRSGD 227
GL +A V F++D D + I + + PG +TP G
Sbjct: 1823 GLKNAPVGVEQQFSVDYTNSGASIASVEVRHGD-QTIPITVKKMKPGQLLCTFTPFVDGP 1881
Query: 228 HQLRVLWAGRLVKGCPLTVKVSG-GS--ESGDASR 323
HQ+ V+ G + P V +S G+ SGDA R
Sbjct: 1882 HQVEVIIDGVPLSDGPYEVFISHLGTVRASGDALR 1916
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 198 ALYTPKRSGDHQLRVLWAGRLVKGCPLTVK 287
A Y PK G+H + + G + G P T K
Sbjct: 1386 ATYVPKCVGNHLIDIFLQGEPIAGSPFTAK 1415
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/104 (28%), Positives = 45/104 (43%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+TP+ +G+H + V G+LV P +KV ++ GDAS+ +
Sbjct: 316 FTPREAGEHLITVKRDGKLVPKAPFKIKVD-KTQVGDASKVEVSGSGKAKGITLQANELL 374
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAG 515
+DT AG G L+ GP+K A E G + P E G
Sbjct: 375 VDTSKAGYGGLSVSVQGPSK-AELTCKEVKSGLIKVLYTPTEPG 417
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/126 (26%), Positives = 48/126 (38%)
Frame = +3
Query: 147 GENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRX 326
G + + G ++ +TPK G H L V++ V G P V SE G A +
Sbjct: 490 GHTDDIEMRDLGQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGG-AHKV 548
Query: 327 XXXXXXXXXXXXXREIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPA 506
I R AG G + GP+K A E +H DG ++ K A
Sbjct: 549 RAAGQGVVRGETGTFNAFNIYHREAGVGAVAVTIEGPSK-ATLEFKDHNDGNCHVDYKVA 607
Query: 507 EAGRHV 524
G +V
Sbjct: 608 TPGEYV 613
Score = 37.1 bits (82), Expect = 0.008
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+ PK +G+H + V G ++ P ++V GG + D + ++
Sbjct: 700 FVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKGTTGQKCEFV 758
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRH 521
I+T AG G LT GP+K A + YE G + + P G +
Sbjct: 759 INTANAGAGILTVQMDGPSK-ATLDAYELEKG-YKVRYTPLAPGSY 802
Score = 33.9 bits (74), Expect = 0.072
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +3
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXX 365
GL + LYTP G + + + +A VK PLTV+ +G S
Sbjct: 405 GLIKVLYTPTEPGVYAIAIKFADHHVKDSPLTVQCTGKSAGRVIQTIQKDVEQHGICLPD 464
Query: 366 REIRSWIDTRLAGPGELTAHCTGP-NKVAYCELYEHGDGTFTLNVKPAEAGRH 521
+E ++ P ++TA P E+ + G + L P G H
Sbjct: 465 QESHLFLKLLNTSPMDITARLMDPKGHTDDIEMRDLGQQYYQLKFTPKMEGIH 517
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPL 278
YTPK G H+L +L G ++G P+
Sbjct: 138 YTPKVHGSHELSILQNGAQLQGTPI 162
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/104 (28%), Positives = 45/104 (43%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+TP+ +G+H + V G+LV P +KV ++ GDAS+ +
Sbjct: 265 FTPREAGEHLITVKRDGKLVPKAPFKIKVD-KTQVGDASKVEVSGSGKAKGITLQANELL 323
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAG 515
+DT AG G L+ GP+K A E G + P E G
Sbjct: 324 VDTSKAGYGGLSVSVQGPSK-AELTCKEVKSGLIKVLYTPTEPG 366
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/126 (26%), Positives = 48/126 (38%)
Frame = +3
Query: 147 GENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRX 326
G + + G ++ +TPK G H L V++ V G P V SE G A +
Sbjct: 439 GHTDDIEMRDLGQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGG-AHKV 497
Query: 327 XXXXXXXXXXXXXREIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPA 506
I R AG G + GP+K A E +H DG ++ K A
Sbjct: 498 RAAGQGVVRGETGTFNAFNIYHREAGVGAVAVTIEGPSK-ATLEFKDHNDGNCHVDYKVA 556
Query: 507 EAGRHV 524
G +V
Sbjct: 557 TPGEYV 562
Score = 37.1 bits (82), Expect = 0.008
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+ PK +G+H + V G ++ P ++V GG + D + ++
Sbjct: 649 FVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKGTTGQKCEFV 707
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRH 521
I+T AG G LT GP+K A + YE G + + P G +
Sbjct: 708 INTANAGAGILTVQMDGPSK-ATLDAYELEKG-YKVRYTPLAPGSY 751
Score = 33.9 bits (74), Expect = 0.072
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +3
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXX 365
GL + LYTP G + + + +A VK PLTV+ +G S
Sbjct: 354 GLIKVLYTPTEPGVYAIAIKFADHHVKDSPLTVQCTGKSAGRVIQTIQKDVEQHGICLPD 413
Query: 366 REIRSWIDTRLAGPGELTAHCTGP-NKVAYCELYEHGDGTFTLNVKPAEAGRH 521
+E ++ P ++TA P E+ + G + L P G H
Sbjct: 414 QESHLFLKLLNTSPMDITARLMDPKGHTDDIEMRDLGQQYYQLKFTPKMEGIH 466
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPL 278
YTPK G H+L +L G ++G P+
Sbjct: 87 YTPKVHGSHELSILQNGAQLQGTPI 111
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/104 (28%), Positives = 45/104 (43%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+TP+ +G+H + V G+LV P +KV ++ GDAS+ +
Sbjct: 263 FTPREAGEHLITVKRDGKLVPKAPFKIKVD-KTQVGDASKVEVSGSGKAKGITLQANELL 321
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAG 515
+DT AG G L+ GP+K A E G + P E G
Sbjct: 322 VDTSKAGYGGLSVSVQGPSK-AELTCKEVKSGLIKVLYTPTEPG 364
Score = 41.9 bits (94), Expect = 3e-04
Identities = 34/126 (26%), Positives = 48/126 (38%)
Frame = +3
Query: 147 GENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRX 326
G + + G ++ +TPK G H L V++ V G P V SE G A +
Sbjct: 437 GHTDDIEMRDLGQQYYQLKFTPKMEGIHTLSVMYKDAHVNGSPFQFTVGSFSEGG-AHKV 495
Query: 327 XXXXXXXXXXXXXREIRSWIDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPA 506
I R AG G + GP+K A E +H DG ++ K A
Sbjct: 496 RAAGQGVVRGETGTFNAFNIYHREAGVGAVAVTIEGPSK-ATLEFKDHNDGNCHVDYKVA 554
Query: 507 EAGRHV 524
G +V
Sbjct: 555 TPGEYV 560
Score = 37.1 bits (82), Expect = 0.008
Identities = 27/106 (25%), Positives = 45/106 (42%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXXREIRSW 383
+ PK +G+H + V G ++ P ++V GG + D + ++
Sbjct: 647 FVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKGTTGQKCEFV 705
Query: 384 IDTRLAGPGELTAHCTGPNKVAYCELYEHGDGTFTLNVKPAEAGRH 521
I+T AG G LT GP+K A + YE G + + P G +
Sbjct: 706 INTANAGAGILTVQMDGPSK-ATLDAYELEKG-YKVRYTPLAPGSY 749
Score = 33.9 bits (74), Expect = 0.072
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Frame = +3
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXXXXXXXXXXXX 365
GL + LYTP G + + + +A VK PLTV+ +G S
Sbjct: 352 GLIKVLYTPTEPGVYAIAIKFADHHVKDSPLTVQCTGKSAGRVIQTIQKDVEQHGICLPD 411
Query: 366 REIRSWIDTRLAGPGELTAHCTGP-NKVAYCELYEHGDGTFTLNVKPAEAGRH 521
+E ++ P ++TA P E+ + G + L P G H
Sbjct: 412 QESHLFLKLLNTSPMDITARLMDPKGHTDDIEMRDLGQQYYQLKFTPKMEGIH 464
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 204 YTPKRSGDHQLRVLWAGRLVKGCPL 278
YTPK G H+L +L G ++G P+
Sbjct: 85 YTPKVHGSHELSILQNGAQLQGTPI 109
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 36.7 bits (81), Expect = 0.010
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Frame = +3
Query: 156 ITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGGSESGDASRXXXX 335
I+ G PGL+ P H++ V AG V G P +VKV E DAS+
Sbjct: 688 ISYGAREITPGLFEYTLIPDAPIKHKIDVSVAGVSVPGAPFSVKV---KEPTDASKLKIF 744
Query: 336 XXXXXXXXXXRE-IRSWIDTRLAGPGEL-TAHCTGPNKVAYCELYEHGDGTFTLNVKPAE 509
+E R ID AGPG + A + ++ ++ DG+FT+
Sbjct: 745 GPGVDGPVYSKEPTRFTIDATQAGPGAVEVALRDDQGENVDLDVLDNQDGSFTVKYTAQR 804
Query: 510 AGRH 521
G +
Sbjct: 805 PGAY 808
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 75 PAVFTIDXXXXXXXXXXXXXXXXDGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAG 254
P FTID GEN+ + + G + YT +R G +QL V++AG
Sbjct: 757 PTRFTIDATQAGPGAVEVALRDDQGENVDLDVLDNQDGSFTVKYTAQRPGAYQLNVVFAG 816
Query: 255 RLVKGCPLTVK 287
+ + VK
Sbjct: 817 EEISPIEINVK 827
Score = 31.1 bits (67), Expect = 0.50
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +3
Query: 9 GNSAADRVTLAGRGLAHAAPQVPAVFTIDXXXXXXXXXXXXXXXXDGENIT-VGLAAAGP 185
G AD VT++G GL Q +ID DG T +
Sbjct: 955 GPPCADMVTVSGPGLGPLVAQRSTYVSIDTTNAGFGDIDVYV---DGPTRTPLHCVDNQD 1011
Query: 186 GLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTV 284
G+ + +TPK+ G + LRV++ V G P +
Sbjct: 1012 GILKMSFTPKQPGLYYLRVMFDNEHVPGSPFQI 1044
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 33.5 bits (73), Expect = 0.095
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 144 DGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
DG + V + G+ Y P G + L +L G + GCP T+ + G
Sbjct: 765 DGSTVEVTMTPRENGIVALSYYPSIEGSYTLNILVKGTPISGCPTTMDIRRG 816
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.095
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 144 DGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
DG + V + G+ Y P G + L +L G + GCP T+ + G
Sbjct: 769 DGSTVEVTMTPRENGIVALSYYPSIEGSYTLNILVKGTPISGCPTTMDIRRG 820
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 33.5 bits (73), Expect = 0.095
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 144 DGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
DG + V + G+ Y P G + L +L G + GCP T+ + G
Sbjct: 769 DGSTVEVTMTPRENGIVALSYYPSIEGSYTLNILVKGTPISGCPTTMDIRRG 820
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 33.5 bits (73), Expect = 0.095
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 144 DGENITVGLAAAGPGLWRALYTPKRSGDHQLRVLWAGRLVKGCPLTVKVSGG 299
DG + V + G+ Y P G + L +L G + GCP T+ + G
Sbjct: 765 DGSTVEVTMTPRENGIVALSYYPSIEGSYTLNILVKGTPISGCPTTMDIRRG 816
>U29097-4|AAM98031.1| 308|Caenorhabditis elegans Hypothetical
protein F18C5.4 protein.
Length = 308
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -3
Query: 447 PPCLVPCSARSVPRDRPASCLSRNGSPSQR---LPPPDRLRSTP 325
PPC++ +A S P PA+ L + +P R +P P L+ TP
Sbjct: 261 PPCIIKTTAASAPAPVPAT-LPSDPAPEVRIPYIPSPKPLKMTP 303
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 429 CSARSVPRDRPASCLSRNGSPSQRLPPPDRLRSTP---HATRLRSPNHLTLSPS 277
C P+ + ++ + PS PPP +L + L+SPNHL L+PS
Sbjct: 818 CDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPS 871
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = -3
Query: 513 PPPPXXXXXXXXXXXXXXXRNTPPCLVPCSARSVPRDRPASCLSRNGSPSQRLPPPDRLR 334
PPPP R PP S P P LS G+ S+R PPP +
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQD-LSTEGNASRRPPPPPKGT 196
Query: 333 STPHATRLRSPNHLT 289
TP P L+
Sbjct: 197 GTPPPPPTGEPQDLS 211
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/75 (25%), Positives = 25/75 (33%)
Frame = -3
Query: 513 PPPPXXXXXXXXXXXXXXXRNTPPCLVPCSARSVPRDRPASCLSRNGSPSQRLPPPDRLR 334
PPPP R PP + P P + G+ S+R PPP +
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGT 103
Query: 333 STPHATRLRSPNHLT 289
TP P L+
Sbjct: 104 GTPPPPPTGEPQDLS 118
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 429 CSARSVPRDRPASCLSRNGSPSQRLPPPDRLRSTP---HATRLRSPNHLTLSPS 277
C P+ + ++ + PS PPP +L + L+SPNHL L+PS
Sbjct: 818 CDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPS 871
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -3
Query: 447 PPCLVPCSARSVPRDRPASCLSRNGSPSQR--LPPPDRLRSTPHATRLRSPNHLTLSPS 277
PP P RS RDRP S G ++R P ++ P RS + LT PS
Sbjct: 447 PPPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPAIQDVPAVPVRRSDSMLTNPPS 505
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = -3
Query: 447 PPCLVPCSARSVPRDRPASCLSRNGSPSQR--LPPPDRLRSTPHATRLRSPNHLTLSPS 277
PP P RS RDRP S G ++R P ++ P RS + LT PS
Sbjct: 395 PPPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPAIQDVPAVPVRRSDSMLTNPPS 453
>U58742-5|AAB36859.3| 711|Caenorhabditis elegans Hypothetical
protein F31A3.5 protein.
Length = 711
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 408 RDRPASCLSRNGSPSQRLPPPDRLRSTP 325
R RP S + NGS +PPP LR +P
Sbjct: 442 RSRPVSYIETNGS-GVAIPPPPDLRCSP 468
>Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical
protein T23G11.3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 417 SVPRDRPASCLSRNGSPSQRLPPPDRLRSTPHATRLRSP 301
+VP DR S R+G S R PPP RL + + + SP
Sbjct: 49 NVPADRWPST-RRDGWSSVRAPPPARLTLSTNNRHIMSP 86
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 79 QYSLSMAVPLDPVLRKLPCLHQMVKTSLWD*QQLDLDYGELSIRLNDLVIISF 237
+Y++ +A+ L ++ L +H + WD + + L Y EL I L ++ F
Sbjct: 178 EYAILLALVLHVTIKYLLHMHDLRNPQSWDNKAVYLLYAELFINLIRCLLYGF 230
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = -2
Query: 520 CRPASAGFTFRVNVPSPCSYSSQYA--TLFGPVQCAVSSPGPASLVSIQERISL 365
CRP + T V PC Y + F VQC+V + + L+S R L
Sbjct: 68 CRPVANKSTLAVFCHGPCKYFGKNTCFVTFAVVQCSVVAASFSILLSFYYRYRL 121
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -3
Query: 423 ARSVPRDRPASCLSRNGSPSQRLPPPDRLRSTPHATRLRSPNHLTLSPSADIL*LVDRP 247
ARS PA+ LS +G S +P P RS +A R + PS L +D P
Sbjct: 550 ARSHFNYSPAAWLSEDGGDSSPVPQPLMCRSPENALRESQCRSIPYVPSLQQLEGLDGP 608
>U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein.
Length = 463
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 417 SVPRDRPASCLSRNGSPSQRLPPPDRLRSTPHATRLRSP 301
+VP DR S R+G S R PPP RL + + + SP
Sbjct: 49 NVPADRWPST-RRDGWSSVRAPPPARLTLSTNNRHIMSP 86
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 417 SVPRDRPASCLSRNGSPSQRLPPPDRLRSTPHATRLRSPNHLTLS 283
+V +D P ++ PS LP PD + H RSP L +
Sbjct: 440 NVTQDSPKEMSYQHSEPSPALPSPDASVPSEHERFARSPPTLVFT 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,666,672
Number of Sequences: 27780
Number of extensions: 251905
Number of successful extensions: 857
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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