Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_K13
         (568 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   1.2  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.5  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   8.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.6  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   8.6  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 237 LAPVWRDFRGLVKVKLVPYGKSTHDKV 317
           L  VW D++G+V  +L+P  ++ +  V
Sbjct: 189 LLSVWWDYKGIVYFELLPPNRTINSVV 215


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 246 VWRDFRGLVKVKLVPYGKSTHDKV 317
           VW D +G+V  +L+P  ++ +  V
Sbjct: 71  VWWDHKGIVYFELLPPNRTINSVV 94


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 261 RGLVKVKLVPYGKSTHDKVNEKWTFTCHHGPDECY 365
           + LV   L P       K  ++WTFT   G D  Y
Sbjct: 24  QNLVNTVLQPRPSFELSKNGDEWTFTSSSG-DNTY 57


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 567  KRPGGSPIVLQTRIALSCQI 508
            +RP G PI L+ R   S +I
Sbjct: 1004 QRPAGPPINLEARALSSSEI 1023


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 567  KRPGGSPIVLQTRIALSCQI 508
            +RP G PI L+ R   S +I
Sbjct: 1000 QRPAGPPINLEARALSSSEI 1019


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 261 RGLVKVKLVPYGKSTHDKVNEKWTFTCHHGPDECY 365
           + LV   L P       K  ++WTFT   G D  Y
Sbjct: 26  QNLVNTVLQPRPSFELSKNGDEWTFTSSSG-DNTY 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,675
Number of Sequences: 438
Number of extensions: 3625
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)