Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_K12
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,...    31   1.3  
AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,...    31   1.3  
AE014296-525|ABC66127.1|  317|Drosophila melanogaster CG34025-PA...    29   5.4  

>AE014296-276|AAN11487.1| 1449|Drosophila melanogaster CG7852-PB,
           isoform B protein.
          Length = 1449

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +2

Query: 29  KGLLKENCESRDNTLRRTERGH----REFEYDKTTG 124
           KG+L + C SR N+LRR + G+    RE   D+  G
Sbjct: 784 KGVLNQECASRGNSLRRVKNGNKWRAREISLDQKPG 819


>AE014296-275|AAF47507.1| 1449|Drosophila melanogaster CG7852-PA,
           isoform A protein.
          Length = 1449

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +2

Query: 29  KGLLKENCESRDNTLRRTERGH----REFEYDKTTG 124
           KG+L + C SR N+LRR + G+    RE   D+  G
Sbjct: 784 KGVLNQECASRGNSLRRVKNGNKWRAREISLDQKPG 819


>AE014296-525|ABC66127.1|  317|Drosophila melanogaster CG34025-PA
           protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
 Frame = -2

Query: 528 FINSIFNKFTPISIVSLISVCRK----FSVFISH 439
           ++ SIF+  +PI I+ +I  C+K    F  +I+H
Sbjct: 236 YVESIFSYISPIEIIEIIKKCKKLQFLFCYYINH 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,838,562
Number of Sequences: 53049
Number of extensions: 336682
Number of successful extensions: 845
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)