Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_K11
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   8.1  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 61  NFTKYLIVERSVQ**SKCSTSYTSNRK*IPAGMAKKCKQ 177
           N   Y   + +VQ  S+ S SY+SN K +    A+ C++
Sbjct: 642 NLNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQNCRR 680


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 128 HLIENEFQPVWLKSANRT 181
           H IE+    +WL   NR+
Sbjct: 58  HFIESGITAIWLSPINRS 75


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
          protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +1

Query: 19 LSCKRSVINYILFV-NF 66
          +SC   +I Y+LF+ NF
Sbjct: 1  MSCGMGMIKYLLFIFNF 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,676
Number of Sequences: 438
Number of extensions: 2034
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)