Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K09
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 69 1e-11
X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 68 2e-11
BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 68 2e-11
X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein. 30 6.4
X70084-1|CAA49689.1| 431|Homo sapiens filamin protein. 30 6.4
M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein. 30 6.4
BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein. 30 6.4
AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein. 30 6.4
AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein. 30 6.4
AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein. 30 6.4
AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein. 30 6.4
AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform... 30 6.4
AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein. 30 6.4
AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein. 30 6.4
AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein. 30 6.4
AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein. 30 6.4
AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) varia... 30 6.4
AB208865-1|BAD92102.1| 1342|Homo sapiens gamma filamin variant p... 30 6.4
>AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type
C2 precursor variant protein.
Length = 151
Score = 68.5 bits (160), Expect = 1e-11
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +2
Query: 26 VIYLSIVAVAAATDVLPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTPDTDI 205
++ LS A A C G + V++SPC PC+L KG + + + FT +
Sbjct: 10 LLALSTAAQAEPVQFRDC--GSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFTSNVQS 67
Query: 206 PDLTNSVVAEVFGVPLPFVGVDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFY 385
V + GVP+PF + C + +CP++ + Y Y + PV S Y
Sbjct: 68 KSSKAVVHGILMGVPVPF-PIPEPDGC-------KSGINCPIQKDKTYSYLNKLPVKSEY 119
Query: 386 PSIDVKVIWSLK-NKSDNLICFQMPARIV 469
PSI + V W L+ +K+ +L C+++P +IV
Sbjct: 120 PSIKLVVEWQLQDDKNQSLFCWEIPVQIV 148
>X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue
specific mRNA. ).
Length = 151
Score = 68.1 bits (159), Expect = 2e-11
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +2
Query: 26 VIYLSIVAVAAATDVLPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTPDTDI 205
++ LS A A C G + V++SPC PC+L KG + + + FT +
Sbjct: 10 LLALSTAAQAEPVQFKDC--GSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFTSNIQS 67
Query: 206 PDLTNSVVAEVFGVPLPFVGVDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFY 385
V + GVP+PF + C + +CP++ + Y Y + PV S Y
Sbjct: 68 KSSKAVVHGILMGVPVPF-PIPEPDGC-------KSGINCPIQKDKTYSYLNKLPVKSEY 119
Query: 386 PSIDVKVIWSLK-NKSDNLICFQMPARIV 469
PSI + V W L+ +K+ +L C+++P +IV
Sbjct: 120 PSIKLVVEWQLQDDKNQSLFCWEIPVQIV 148
>BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type
C2 protein.
Length = 151
Score = 68.1 bits (159), Expect = 2e-11
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +2
Query: 26 VIYLSIVAVAAATDVLPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTPDTDI 205
++ LS A A C G + V++SPC PC+L KG + + + FT +
Sbjct: 10 LLALSTAAQAEPVQFKDC--GSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFTSNIQS 67
Query: 206 PDLTNSVVAEVFGVPLPFVGVDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFY 385
V + GVP+PF + C + +CP++ + Y Y + PV S Y
Sbjct: 68 KSSKAVVHGILMGVPVPF-PIPEPDGC-------KSGINCPIQKDKTYSYLNKLPVKSEY 119
Query: 386 PSIDVKVIWSLK-NKSDNLICFQMPARIV 469
PSI + V W L+ +K+ +L C+++P +IV
Sbjct: 120 PSIKLVVEWQLQDDKNQSLFCWEIPVQIV 148
>X82245-1|CAA57709.1| 1246|Homo sapiens nidogen protein.
Length = 1246
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 100 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 156
>X70084-1|CAA49689.1| 431|Homo sapiens filamin protein.
Length = 431
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 289 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 337
>M30269-1|AAA59932.1| 1247|Homo sapiens nidogen protein.
Length = 1247
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>BC045606-1|AAH45606.1| 1114|Homo sapiens NID1 protein protein.
Length = 1114
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>AL139161-2|CAI23422.1| 1247|Homo sapiens nidogen 1 protein.
Length = 1247
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>AL139161-1|CAI23421.1| 1114|Homo sapiens nidogen 1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>AL122018-2|CAI22681.1| 1247|Homo sapiens nidogen 1 protein.
Length = 1247
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>AL122018-1|CAI22680.1| 1114|Homo sapiens nidogen 1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 101 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 157
>AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform
protein.
Length = 2692
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 1926 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 1974
>AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein.
Length = 2725
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 1959 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 2007
>AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein.
Length = 2705
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 1939 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 1987
>AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein.
Length = 2691
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 1926 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 1974
>AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein.
Length = 2705
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 1939 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 1987
>AB209448-1|BAD92685.1| 1241|Homo sapiens nidogen (enactin) variant
protein.
Length = 1241
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 FGVPLPFVG-VDGVSICDKVYTADEKKTSCPLKAGEKYIYEDSFPVLSFYPSIDVKVIW 412
FG PF+ +D KVY ++ S +A E FP +SF PS V V W
Sbjct: 100 FGAVAPFLADLDTTDGLGKVYYREDLSPSITQRAAE--CVHRGFPEISFQPSSAVVVTW 156
>AB208865-1|BAD92102.1| 1342|Homo sapiens gamma filamin variant
protein.
Length = 1342
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 50 VAAATDV-LPCPNGPSKDLSDAVHLSPCKGVPCRLKKGTNQHIKINFTP 193
V +TDV L L+ ++ PC LK+ N+HI I+FTP
Sbjct: 576 VGTSTDVSLKITESDLSQLTASIRAPSGNEEPCLLKRLPNRHIGISFTP 624
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,991,509
Number of Sequences: 237096
Number of extensions: 1344590
Number of successful extensions: 2598
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2595
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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