Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_K08
         (478 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070616-1|AAL48087.1|  197|Drosophila melanogaster RE71854p pro...    44   1e-04
AE014134-1356|AAF52571.2|  197|Drosophila melanogaster CG14534-P...    44   1e-04
BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p pro...    38   0.007
BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p pro...    38   0.007
AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich pro...    38   0.007
AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA...    38   0.007
AY075518-1|AAL68326.1|  278|Drosophila melanogaster RE68367p pro...    36   0.028
AE014297-28|AAF52158.1|  278|Drosophila melanogaster CG14643-PA ...    36   0.028
AY071066-1|AAL48688.1|  198|Drosophila melanogaster RE14272p pro...    33   0.15 
AE013599-1351|AAF58614.1|  198|Drosophila melanogaster CG8986-PA...    33   0.15 
BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    30   1.9  
AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    30   1.9  

>AY070616-1|AAL48087.1|  197|Drosophila melanogaster RE71854p
           protein.
          Length = 197

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 359 APIVQKHIYVHVXXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           AP++ KH+YVHV       Q P+       PQKHYKI+FI
Sbjct: 58  APVIHKHVYVHVPPPEPEYQAPRKPLYVPPPQKHYKIVFI 97


>AE014134-1356|AAF52571.2|  197|Drosophila melanogaster CG14534-PA
           protein.
          Length = 197

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +2

Query: 359 APIVQKHIYVHVXXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           AP++ KH+YVHV       Q P+       PQKHYKI+FI
Sbjct: 58  APVIHKHVYVHVPPPEPEYQAPRKPLYVPPPQKHYKIVFI 97


>BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p
           protein.
          Length = 286

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 365 IVQKHIYVHV--XXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +VQKHIYVHV         QRP +  G +  QKHYKIIFI
Sbjct: 130 LVQKHIYVHVPPPEQEEVRQRPNLPIGQS--QKHYKIIFI 167



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 41 SARPEAGYSYNAP 79
          +ARPEAGY+YN P
Sbjct: 14 AARPEAGYNYNRP 26


>BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p
           protein.
          Length = 286

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 365 IVQKHIYVHV--XXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +VQKHIYVHV         QRP +  G +  QKHYKIIFI
Sbjct: 130 LVQKHIYVHVPPPEQEEVRQRPNLPIGQS--QKHYKIIFI 167



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 41 SARPEAGYSYNAP 79
          +ARPEAGY+YN P
Sbjct: 14 AARPEAGYNYNRP 26


>AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich
           protein protein.
          Length = 286

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 365 IVQKHIYVHV--XXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +VQKHIYVHV         QRP +  G +  QKHYKIIFI
Sbjct: 130 LVQKHIYVHVPPPEQEEVGQRPNLPIGQS--QKHYKIIFI 167



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 41 SARPEAGYSYNAP 79
          +ARPEAGY+YN P
Sbjct: 14 AARPEAGYNYNRP 26


>AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA
           protein.
          Length = 286

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +2

Query: 365 IVQKHIYVHV--XXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +VQKHIYVHV         QRP +  G +  QKHYKIIFI
Sbjct: 130 LVQKHIYVHVPPPEQEEVRQRPNLPIGQS--QKHYKIIFI 167



 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +2

Query: 41 SARPEAGYSYNAP 79
          +ARPEAGY+YN P
Sbjct: 14 AARPEAGYNYNRP 26


>AY075518-1|AAL68326.1|  278|Drosophila melanogaster RE68367p
           protein.
          Length = 278

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 365 IVQKHIYVHVXXXXXXXQR-PQVISGGAIPQKHYKIIFI 478
           +V K IYVHV        R PQ +   A P+KHY+I+FI
Sbjct: 112 LVSKDIYVHVPPAEEPEDRYPQPVLPPAPPRKHYRIVFI 150


>AE014297-28|AAF52158.1|  278|Drosophila melanogaster CG14643-PA
           protein.
          Length = 278

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 365 IVQKHIYVHVXXXXXXXQR-PQVISGGAIPQKHYKIIFI 478
           +V K IYVHV        R PQ +   A P+KHY+I+FI
Sbjct: 112 LVSKDIYVHVPPAEEPEDRYPQPVLPPAPPRKHYRIVFI 150


>AY071066-1|AAL48688.1|  198|Drosophila melanogaster RE14272p
           protein.
          Length = 198

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 365 IVQKHIYVHVXXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +V K++YVHV                A+P+KHYKIIFI
Sbjct: 69  LVTKNVYVHVPPEEPEFYPASSPIQTAVPKKHYKIIFI 106


>AE013599-1351|AAF58614.1|  198|Drosophila melanogaster CG8986-PA
           protein.
          Length = 198

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 365 IVQKHIYVHVXXXXXXXQRPQVISGGAIPQKHYKIIFI 478
           +V K++YVHV                A+P+KHYKIIFI
Sbjct: 69  LVTKNVYVHVPPEEPEFYPASSPIQTAVPKKHYKIIFI 106


>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 368 VQKHIYVHVXXXXXXXQ---RPQVISGGAIPQKHYKIIFI 478
           V KHIYVHV       +   + +V       QKHYKI+FI
Sbjct: 159 VHKHIYVHVPPKDFEEEDAIQTRVHHQQGPKQKHYKIVFI 198


>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +2

Query: 368 VQKHIYVHVXXXXXXXQ---RPQVISGGAIPQKHYKIIFI 478
           V KHIYVHV       +   + +V       QKHYKI+FI
Sbjct: 127 VHKHIYVHVPPKDFEEEDAIQTRVHHQQGPKQKHYKIVFI 166


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,879,881
Number of Sequences: 53049
Number of extensions: 98216
Number of successful extensions: 359
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)