Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K07
(525 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 42 4e-05
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 31 0.080
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.14
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 30 0.24
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.32
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.56
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 0.56
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.74
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 28 0.74
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 28 0.98
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 0.98
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.3
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.3
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 27 1.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 1.3
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 2.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.3
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 26 3.0
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 3.0
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 3.0
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 26 4.0
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 4.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 5.2
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 5.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 5.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 5.2
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 5.2
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 5.2
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 25 6.9
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 6.9
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 6.9
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 6.9
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 6.9
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 6.9
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 9.1
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 25 9.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.1
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 9.1
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 9.1
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 9.1
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 25 9.1
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 9.1
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 42.3 bits (95), Expect = 4e-05
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +2
Query: 155 KHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
K +DF+K I + A +NS + E LKE S + ++ EL+N L+ + + K
Sbjct: 455 KKIKDFEK-IEQDLRACLNSSSNE-----LKEKSALIDKKDQELNN-LREQIKEQK-KVS 506
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLA 484
E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 34.3 bits (75), Expect = 0.011
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL--QTGIQNTLKESQNLAKEVGV 499
K K L Q + R ED+ K + E +L E L Q +++L +++N E+
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDVLK---EKESLIISLEESLSNQRQKESSLLDAKN---ELEH 1446
Query: 500 NLDQTSQK 523
LD TS+K
Sbjct: 1447 MLDDTSRK 1454
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 31.5 bits (68), Expect = 0.080
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Frame = +2
Query: 107 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 268
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 269 QQVSELSNSLQGA------------LTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEK 412
+QVS L L+ A A K ++ + + E+ V DL + DV
Sbjct: 125 KQVSSLVRFLRFASHNCVHPSDDAPFNSAVEKLLVIVYEGTEKSEKAVADLNDSSTDVVP 184
Query: 413 QATALHEKLQTGIQN 457
++ + + + + N
Sbjct: 185 ESEVSFQTISSRVDN 199
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.7 bits (66), Expect = 0.14
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +2
Query: 242 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 412
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 413 Q------ATALHEKLQTGIQNTLKESQNLAKEVGV 499
+ A + +KL+ L++ ++L KE+ +
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 26.6 bits (56), Expect = 2.3
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 263 MVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 442
+VQ+ S L + L +D + K E L+ + R V+DL K + +Q T L+EK+Q
Sbjct: 194 LVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.9 bits (64), Expect = 0.24
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Frame = +2
Query: 185 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 340
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 341 LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTGIQNTLKESQ---NLAKEVGVN 502
LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 247 LQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN 304
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 341 LQQARQNLERTVEDLRKAHPDVEK 412
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.7 bits (61), Expect = 0.56
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +1
Query: 202 NRQLKEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRG 381
N KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 673 NHHRKESIPSKQPTEGQ---HARQESLPSQQTTETKHLRKE----STPSKQPTEGQHTRQ 725
Query: 382 SPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 486
+ + ET H ++ P +H + E P +
Sbjct: 726 ESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
Score = 28.3 bits (60), Expect = 0.74
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 289 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 459
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 460 TKGEPEPGE 486
T+ E P +
Sbjct: 723 TRQESLPSQ 731
Score = 24.6 bits (51), Expect = 9.1
Identities = 22/80 (27%), Positives = 31/80 (38%)
Frame = +1
Query: 214 KEHGELEQSTEGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQG 393
KE +Q TEG+ H QQ+T RK S P+ P G H+R
Sbjct: 709 KESTPSKQPTEGQ---HTRQESLPSQQTTETKHLRKE----SIPSKQPTEGQHARQESLP 761
Query: 394 APRRRETSHRITREAANRHP 453
+ + ET H ++ P
Sbjct: 762 SQQTTETKHLRKESIPSKQP 781
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 28.7 bits (61), Expect = 0.56
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
D K ++D Q E + +S N ES N+ + D ++Q V N+ + L+++
Sbjct: 127 DYSKDSEDEQDY--ELRPRVSSSWNNESYNRLPIKTKDGLLQNVVADVNNGEEFLSESES 184
Query: 326 KAK-EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQ 454
+A E+ + ++++E+ +K P++ + ++K GIQ
Sbjct: 185 EASLEIDSDIKDEKQKSLEE-QKIAPEIPVKQQIKNDKEALGIQ 227
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.74
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 343
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 344 QQARQNLERTVED 382
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.3 bits (60), Expect = 0.74
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 346
D K+ FN+I + E K L ++ + +Q+SE++ +A KA++ L+
Sbjct: 14 DSLKSKISNFNSIFDRFLQEERKKLLNNKNEYL-RQLSEIN--------EAQKKAEKSLE 64
Query: 347 QARQNLERTVEDLRKAHPD---VEKQATALHEKLQTGIQNTLKESQNL 481
Q + E L K H + E++ + EKL ++ K S+ L
Sbjct: 65 QTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 27.9 bits (59), Expect = 0.98
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 206 VNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 385
+N S++ L + D + S + NG A+E+ A + L VE+L
Sbjct: 29 LNLPTNSSISVTLSQ-DDLRTVTTASCSEKFENDTLWLNGNAEEIF--ANKRLRVCVEEL 85
Query: 386 RKAHPDVEKQ 415
RKA D+E++
Sbjct: 86 RKARLDLEEE 95
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.98
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 373
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 360 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 241
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 125 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 301
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 272 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE------KQATALHE 433
Q +E SN+ A ++ + + +E L L TV + R + + + A+ ++E
Sbjct: 550 QSNETSNTFPAASSNISSQLRE-LHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINE 608
Query: 434 KLQTGIQNTLKESQNLAKEVGVNLDQTS 517
++QT ++L S ++ G QTS
Sbjct: 609 RIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 260 SMVQQVSELSNSLQGALTDANGKAKEVLQQAR---QNLERTVEDLRKAHPDVEKQATALH 430
++ QQ ++L + L + + + K E L+ +NL + + K +E + TAL
Sbjct: 759 TLEQQANDLKSELSSEMDELDPKDVEALKSLSGQIENLSHEFDAIIKERAHIEARKTALE 818
Query: 431 EKLQTGI 451
+L T +
Sbjct: 819 YELNTNL 825
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 62 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 169
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 182 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 352
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 221 TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQN----LERTVEDLR 388
TE+ + L + + ++ +++++L N+ Q + + K + + LE+T+EDL+
Sbjct: 875 TETKHDILAQRNRNVSEKMNDLENAAQKFFSSPDRKNGYLYPSEHTSKIEYLEKTIEDLK 934
Query: 389 KAHPDVEKQATALHEKLQTGIQNTLKESQNL 481
A D K L + + + + T K + +
Sbjct: 935 LALQDELKNRNLLMDDISSYNKQTTKLQEKI 965
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 365 ERTVEDLRK-AHPDVEKQATALHEKLQTGIQNTLKES 472
ERT E + A D+EKQ + H++ Q+ + + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.2 bits (55), Expect = 3.0
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT-- 313
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 314 DANGKAKEVLQQARQNLE-RTVEDLRK-------AHPDVEKQATALHEKLQ 442
+A K K V + +E ++ RK + ++ QA+ H+KLQ
Sbjct: 138 EALAKRKLVNDAVKHFIELNRLKTYRKELYDEVISMNEIPSQASTTHQKLQ 188
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 3.0
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Frame = +2
Query: 89 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNK---ALKEGSD 259
+AL G + + I + +EK A+D S + +N+ K ++E +
Sbjct: 298 LALQRGKYTQEEVDKLIQERMEKVAEDLHAQYSAKHTQKINAFKANYARKYEATIQELQN 357
Query: 260 SM--VQQVSELSNS----LQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 421
+ ++SNS + AL N ++ L++A Q + + L D+ K
Sbjct: 358 QIGTAPNAPKISNSNWEEERRALKADNQTLQKQLEKAIQERQDMSDFLNNFKADMAKSDK 417
Query: 422 AL--HEKLQTGIQNTLK-ESQNLAKEVGVNLDQTSQ 520
L + QTG TL+ + Q L +E+ V ++ Q
Sbjct: 418 LLMQQQSQQTGDLETLRLQLQALQEELRVEREERQQ 453
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 344 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQ 475
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 308 LTDANGKAKEVLQQARQN 361
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 5.2
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Frame = +2
Query: 101 HGAMVRRDAPNTILQDLEKHAQDFQKTISE-QFNAIVNSKNTESLNKALKEGSDSMVQQV 277
HG +P LQ H + Q T++ NA V S ++ S V
Sbjct: 1719 HGVGAEMASPYQPLQPASAHLPNLQPTLAPINQNAYVPSNIAPAMGAMQSAPSAEAVAAP 1778
Query: 278 SELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTG 448
SE N K+ QQA+Q + V DL + + EKQ + ++G
Sbjct: 1779 SESLNL-----------NKDRSQQAKQAAAQNVADLVRQEEEKEKQKQKAKKNAESG 1824
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 320 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 445
N +K L+ AR +L+ ++ED KA+ + E+ LQT
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQT 74
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 374 VEDLRKAHPDVEKQATALHEKLQTGIQNTL 463
+ DL A PD++ + HE L G+Q +
Sbjct: 353 IRDLCAAPPDLQLRCALRHELLSAGLQKAI 382
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 5.2
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 224 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 403
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR+
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTL 879
Query: 404 V-EKQATALHEKLQTGIQNTLK 466
V + Q+ K +Q T++
Sbjct: 880 VLQLQSNITELKQDITLQRTVR 901
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 5.2
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Frame = +2
Query: 107 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 280
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 281 E-LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEK----LQT 445
+ NSL +L+ ++ +R NL+ + A D + A L L++
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWDNTADNDSQIDAQDLSRSTPSPLRS 191
Query: 446 GIQNTLKESQNLAKE 490
++N L+ + K+
Sbjct: 192 AMENVLQSLNAMGKK 206
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 131 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 298
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 6.9
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +2
Query: 134 TILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT 313
TIL L + Q F+K I+ SKN +S +L + D + + +L +
Sbjct: 343 TILSSLSRSCQKFRKKIAFTLFVGKQSKNDDSDFSSLCQRLDEISASCNNDYTTLLYQIR 402
Query: 314 DANGKAKEVLQQARQNLERTVEDLRK 391
E + + LE +E LRK
Sbjct: 403 TFGYAVDEKHFKTNERLECLLEKLRK 428
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 6.9
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 381 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 232
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.0 bits (52), Expect = 6.9
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 230 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE 409
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 410 KQATALHEKLQTGI-QNTLKES-QNLAKEV 493
++A + + I Q+ LK + +NL V
Sbjct: 64 QEAVRCVAIISSKIPQDKLKSTVENLLSGV 93
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 6.9
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 262
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 6.9
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 236 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP 400
+ ++E S++ + SE+S + A+TD + KE+ A ++ + +KA P
Sbjct: 30 REIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATP 83
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 6.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 176 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 295
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 219 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 103
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 471 LSFSVFWMPVCSFSCNAVACFSTS 400
LSFS +PV S C + CF S
Sbjct: 307 LSFSRISLPVRSVFCKHIQCFDAS 330
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 24.6 bits (51), Expect = 9.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 400 RRRETSHRITREAANRHPEHTKGEPEPGEGS-RRQPGSDLTE 522
R E+SH T + TK EP+P GS ++P S+L E
Sbjct: 287 RSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKPVSELEE 328
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.6 bits (51), Expect = 9.1
Identities = 16/73 (21%), Positives = 36/73 (49%)
Frame = +2
Query: 224 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPD 403
E + A E S++Q++SEL +QG L +++ RQ+ + ++ L++ +
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLEN--PDLIAALRQDKGQNLQHLQEHYNI 136
Query: 404 VEKQATALHEKLQ 442
++ L++ Q
Sbjct: 137 TPERIAVLYKFAQ 149
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 9.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 19 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 117
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 9.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 216 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 109
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 24.6 bits (51), Expect = 9.1
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +2
Query: 266 VQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR--KAHPDVEKQATA---LH 430
V ++ N+ Q AL A + + ++QNL ++ D+R + P + +A
Sbjct: 202 VDEIVVPQNNFQSALEHAVPVSLDTQNLSQQNLSKSNSDVRLSTSSPSITVDFSADKETD 261
Query: 431 EKLQTGIQNTLKESQNLAKE 490
EK + +K +QN+ E
Sbjct: 262 EKRERNCDKQVKAAQNILPE 281
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 9.1
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 343 PTSSP--ELGAHSRGSPQG 393
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.6 bits (51), Expect = 9.1
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +2
Query: 284 LSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTL 463
+ N+L + N + E +NLE DL++ P +TA + I L
Sbjct: 1657 VENNLVAPMIPNNTELNEDTSAVSRNLENATNDLKETFPTTTTISTARAKPGNNDINTIL 1716
Query: 464 KESQN 478
+ + +
Sbjct: 1717 RRNNS 1721
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,946,087
Number of Sequences: 5004
Number of extensions: 35787
Number of successful extensions: 224
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 214353836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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