Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K07
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 36 0.013
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 36 0.013
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 36 0.018
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 36 0.018
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 36 0.018
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 34 0.072
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 32 0.22
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 32 0.22
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 32 0.29
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.38
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.38
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.38
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 31 0.50
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 31 0.50
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 31 0.50
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 31 0.50
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 31 0.67
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.67
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 30 0.88
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 30 1.2
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 1.5
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 2.0
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 3.6
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 3.6
U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical pr... 28 3.6
U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 28 3.6
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 28 3.6
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 28 4.7
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 4.7
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 6.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 6.2
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 6.2
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 6.2
U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical p... 27 6.2
AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate o... 27 6.2
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 8.2
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 27 8.2
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 8.2
AF043702-1|AAK21499.1| 319|Caenorhabditis elegans Hypothetical ... 27 8.2
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 27 8.2
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/115 (21%), Positives = 50/115 (43%)
Frame = +2
Query: 176 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQAR 355
+++ Q NA V + K + D V+ + GAL A + + + Q
Sbjct: 262 ESLDNQKNANVVGDLLAKVQKVADDTIDKSKTTVAADVAKMSGALQKAEEEVVQTIDQTV 321
Query: 356 QNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQTSQ 520
+N++ V +++K DVEK + + ++ + K + ++G +D TSQ
Sbjct: 322 KNIKSNVNEVKK---DVEKNIAEKVDDITKELEKSAKSLEETTDKIGSKIDNTSQ 373
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
T06E4.1 protein.
Length = 1295
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/128 (19%), Positives = 63/128 (49%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 319
L E Q+ Q ++ + N++ ++ LKE +++ ++S S + ++ DA
Sbjct: 746 LHSAESTNQELQVSLEMLKIEVSNARQKVMESEVLKESFEALQLELSA-SQEVSRSVVDA 804
Query: 320 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGV 499
+ K+ L + L+ +ED K+ D+++ + ++LQ +QN K++ + + +
Sbjct: 805 AVQEKDGLLRLVDTLKLKIEDTEKSAQDLQQSSVEEIKQLQLDLQN-FKQNAEVLESLNE 863
Query: 500 NLDQTSQK 523
L+ + ++
Sbjct: 864 KLNSSHKR 871
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 36.3 bits (80), Expect = 0.013
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 319
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 320 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTL 463
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 36.3 bits (80), Expect = 0.013
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 319
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREE---- 208
Query: 320 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTL 463
QQ + L E L+ A E + L +KL QN L
Sbjct: 209 --------QQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 248
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 35.9 bits (79), Expect = 0.018
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Frame = +2
Query: 101 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 280
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 281 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 421
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
Query: 422 ALHEKL---QTGIQNTLKESQNLAKEVGVNLDQ-TSQK 523
++L + ++ ++ A+++ LDQ TS K
Sbjct: 1214 DQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGK 1251
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 35.9 bits (79), Expect = 0.018
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Frame = +2
Query: 101 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 280
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1097 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1153
Query: 281 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 421
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1154 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1213
Query: 422 ALHEKL---QTGIQNTLKESQNLAKEVGVNLDQ-TSQK 523
++L + ++ ++ A+++ LDQ TS K
Sbjct: 1214 DQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGK 1251
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 35.9 bits (79), Expect = 0.018
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Frame = +2
Query: 101 HGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVS 280
H R + ++ L++ +D Q ISE + N + + S KA + SD + +++
Sbjct: 1100 HSVSSRLEDEQALVSKLQRQIKDGQSRISELEEELENERQSRS--KADRAKSD-LQRELE 1156
Query: 281 ELSNSL--QGALTDAN-----------GKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 421
EL L QG T A K + L++A N E + LRK H D + T
Sbjct: 1157 ELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKHTDAVAELT 1216
Query: 422 ALHEKL---QTGIQNTLKESQNLAKEVGVNLDQ-TSQK 523
++L + ++ ++ A+++ LDQ TS K
Sbjct: 1217 DQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGK 1254
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 33.9 bits (74), Expect = 0.072
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ---VSELSNSLQGAL 310
L++LE +A+ + + EQ N +K + L K+LK + + V+EL LQ
Sbjct: 111 LKELENNAEALKTQLQEQTNDAKKAK--DELQKSLKSAAARATEATTAVAELQAKLQTVE 168
Query: 311 TDANGK---AKEVLQQARQNLERTVEDLRKAHPDVEK 412
+ + AKE L +QN ER +L+K ++++
Sbjct: 169 KEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQR 205
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 134 TILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKEGSDSMVQQVSELSNSLQGAL 310
T L+D+ +D + + E+ + + +S+N E N L++ + ++V +L+ L +
Sbjct: 268 TTLEDINGKYEDERDRLQEEVDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASE 327
Query: 311 TDANGKAKEVLQQARQNLERTVEDLRKA 394
+ EV ++++ +E VEDL +A
Sbjct: 328 VAKRSLSSEV-DESKKLMELMVEDLLQA 354
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 32.3 bits (70), Expect = 0.22
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Frame = +2
Query: 224 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH-- 397
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEHEG 388
Query: 398 --PDVEKQATALHEKLQTGI---QNTLKESQNLAKEVGVNLDQTSQ 520
++EK+ + EK + I + KE++ + KE V L ++ Q
Sbjct: 389 QMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKE-NVYLSESKQ 433
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 32.3 bits (70), Expect = 0.22
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Frame = +2
Query: 224 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAH-- 397
E L K KE + V+Q+ E+ L+ L + KE+ Q LE+ +EDLRK H
Sbjct: 338 EHLEKQRKEAWEK-VEQLQEMLGELEAELD----RQKELKLQ----LEKDMEDLRKEHEG 388
Query: 398 --PDVEKQATALHEKLQTGI---QNTLKESQNLAKEVGVNLDQTSQ 520
++EK+ + EK + I + KE++ + KE V L ++ Q
Sbjct: 389 QMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKE-NVYLSESKQ 433
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.9 bits (69), Expect = 0.29
Identities = 29/146 (19%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Frame = +2
Query: 89 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAI------VNSKNTESLNKALKE 250
+A + A D N +L + E+ A+ + + ++ +A K ES+N+ L+E
Sbjct: 1331 IANINRARQLEDEKNALLDEKEE-AEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEE 1389
Query: 251 GSDSMVQQVSELSNSLQGALTDANG--KAKEVLQQARQNLERTVEDLRKAHPDVEKQATA 424
++ V L L+ + ++K+ +QQ ++ +E++R +H D EK+
Sbjct: 1390 LRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKK 1449
Query: 425 LHEKL---QTGIQNTLKESQNLAKEV 493
++ + +Q L + +++E+
Sbjct: 1450 FESQMAEERVAVQKALLDRDAMSQEL 1475
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 31.5 bits (68), Expect = 0.38
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Frame = +2
Query: 131 NTILQDLEKHAQDFQKTISEQFNAI--VNSKNTESLNKALK-EGSDSMVQQVSELSNSLQ 301
N +D+E + Q I E + + K E L++ + ++ +Q E +
Sbjct: 95 NRFQRDVEMSRMEAQNKIEEMSVEVDAAHKKVNEVLSEVEQLRATNFDLQMHIETAKRTM 154
Query: 302 GALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE---KQATALHEKLQTGIQNTLKES 472
L D N + ++ + + + E EDL+++ DVE +Q AL +L G++ E+
Sbjct: 155 EELADCNEELEKRVDEYEEAAEEKDEDLKQSTWDVETLTRQNEALRVELD-GVRQGFHET 213
Query: 473 QNLAKEV 493
+ LA EV
Sbjct: 214 RELADEV 220
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 31.5 bits (68), Expect = 0.38
Identities = 29/89 (32%), Positives = 42/89 (47%)
Frame = +1
Query: 244 EGRLRLHGAAGLRVIQQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHR 423
+GR L G G R +Q G S G+ P A S G +G+ ++ +
Sbjct: 225 DGRPGLEGTPGTRGVQGERG--------SRGARGPPGPPGPAGSDGR-KGSCAHCQSDDK 275
Query: 424 ITREAANRHPEHTKGEPEPGEGSRRQPGS 510
+++ ANR PE T +PE GE S +QP S
Sbjct: 276 LSQGGANRRPEET--DPE-GEFSNQQPAS 301
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHT--KGEPEPGEGSRRQPG 507
GS PT SP G RGSP R R+A P + G P G R PG
Sbjct: 414 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPG 473
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 474
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 438 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 494
Query: 475 EPGEGS 492
P GS
Sbjct: 495 SPPTGS 500
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHT--KGEPEPGEGSRRQPG 507
GS PT SP G RGSP R R+A P + G P G R PG
Sbjct: 435 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPG 494
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 474
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 459 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 515
Query: 475 EPGEGS 492
P GS
Sbjct: 516 SPPTGS 521
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHT--KGEPEPGEGSRRQPG 507
GS PT SP G RGSP R R+A P + G P G R PG
Sbjct: 420 GSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPG 479
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 298 TGCVDRRKR*S*GSAPTSSPELGAHSRGSP-QGAPRRRETSHRITREAANRHPEHTKGEP 474
TG R+KR + PT SP G+ G P +G P + E+S +RE R P +
Sbjct: 444 TGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSESSE--SREGP-RGPRRSPPTG 500
Query: 475 EPGEGS 492
P GS
Sbjct: 501 SPPTGS 506
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 31.1 bits (67), Expect = 0.50
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 EADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQK 178
E D A +L+ R SD A +A C L + + A A + + LQ+ EK +K
Sbjct: 400 EIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEK 456
Query: 179 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQ 358
+ + I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 457 EVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDI 516
Query: 359 NLERTVEDLRKAHPDVEKQA 418
++ E + A D EK++
Sbjct: 517 LKKKCAEAEKNAEKDREKES 536
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 31.1 bits (67), Expect = 0.50
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 EADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQK 178
E D A +L+ R SD A +A C L + + A A + + LQ+ EK +K
Sbjct: 386 EIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEK 442
Query: 179 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQ 358
+ + I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 443 EVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDI 502
Query: 359 NLERTVEDLRKAHPDVEKQA 418
++ E + A D EK++
Sbjct: 503 LKKKCAEAEKNAEKDREKES 522
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 31.1 bits (67), Expect = 0.50
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 5 EADLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQK 178
E D A +L+ R SD A +A C L + + A A + + LQ+ EK +K
Sbjct: 386 EIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEK 442
Query: 179 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQ 358
+ + I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 443 EVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDI 502
Query: 359 NLERTVEDLRKAHPDVEKQA 418
++ E + A D EK++
Sbjct: 503 LKKKCAEAEKNAEKDREKES 522
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/100 (19%), Positives = 48/100 (48%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 445
++++ ++ R+ + +TVE D EK A L+EK+ +
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDS 2001
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 346
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 347 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQ 475
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/100 (19%), Positives = 48/100 (48%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
+ K+ D +K + +++ S N ++ + + + S+ Q ++ L + +
Sbjct: 1904 NFSKNISDSEKAVFSNLISVITSHNLSTIGTSSETTTASISYQ--DIPEMLAASKLWISR 1961
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQT 445
++++ ++ R+ + +TVE D EK A L+EK+ +
Sbjct: 1962 NSEKLKKEIREPVIQTVESFWNTTNDQEKVAVLLNEKIDS 2001
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Frame = +2
Query: 167 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 346
D+++ I Q + I+ T + KA SD + + + + K K +L
Sbjct: 3404 DYRRKIFNQNSEIIFGDLTRDVVKAAFSVSDETLNTLFSQLEQSDWSQIKLSSKQKSILS 3463
Query: 347 Q-----ARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQ 475
A NL+ + L D E+ +L E+ ++NT K Q
Sbjct: 3464 ANIKSLATSNLDTLIGQLMPREADSEQSEASLSERSSVEMENTFKIQQ 3511
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +2
Query: 161 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQT 514
E A + + ED +++ + +QA EK + + K + + +Q
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDDAKESAQGYFEQA 223
Query: 515 SQK 523
K
Sbjct: 224 KDK 226
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +2
Query: 161 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQT 514
E A + + ED +++ + +QA EK + + K + + +Q
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDDAKESAQGYFEQA 223
Query: 515 SQK 523
K
Sbjct: 224 KDK 226
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +2
Query: 161 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQT 514
E A + + ED +++ + +QA EK + + K + + +Q
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDDAKESAQGYFEQA 223
Query: 515 SQK 523
K
Sbjct: 224 KDK 226
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +2
Query: 161 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 334
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQT 514
E A + + ED +++ + +QA EK + + K + + +Q
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA---KEKASDALDSAQKHGDDAKESAQGYFEQA 223
Query: 515 SQK 523
K
Sbjct: 224 KDK 226
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/96 (25%), Positives = 43/96 (44%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 394
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 395 HPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVN 502
++EK L E + +QN+ K Q + + +N
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLN 728
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = +2
Query: 152 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 316
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 317 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVG 496
AKE L+ + ++ + A D EK+ L E+L+ Q+ L+ SQ LA
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELASSQK 422
Query: 497 VNLDQTSQK 523
+ Q +K
Sbjct: 423 ADKIQELEK 431
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.7 bits (66), Expect = 0.67
Identities = 24/96 (25%), Positives = 43/96 (44%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKA 394
KN + + A KE + +Q++ + L+ + K LQQA Q+ + LR
Sbjct: 636 KNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRA- 694
Query: 395 HPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVN 502
++EK L E + +QN+ K Q + + +N
Sbjct: 695 --EIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLN 728
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Frame = +2
Query: 152 EKHAQDFQKT-ISEQFNAI--VNSKNTESLNKALKEGSDSM--VQQVSELSNSLQGALTD 316
E A + +K+ + EQ + + V++ E + K K M + + +E + L
Sbjct: 304 ELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAG 363
Query: 317 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVG 496
AKE L+ + ++ + A D EK+ L E+L+ Q+ L+ SQ LA
Sbjct: 364 ELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERA-QSALESSQELASSQK 422
Query: 497 VNLDQTSQK 523
+ Q +K
Sbjct: 423 ADKIQELEK 431
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.88
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Frame = +2
Query: 74 VLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEG 253
+L +A + + +R+ L + HA + +K ++E + +A E
Sbjct: 262 MLEKALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWEM 321
Query: 254 SDSMVQQVSELSNSLQGAL--TDANGKAKEVLQQAR---------QNLERTVEDLRKAHP 400
+ ++ SL G+L T G +++++ + Q LER V DLRK H
Sbjct: 322 EKTQLRMQLNKDTSLTGSLKRTTTPGSTEDLIRMRKSIQSKDDKIQQLERMVNDLRKTHG 381
Query: 401 DVEKQ 415
D +Q
Sbjct: 382 DKTEQ 386
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 340 APTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRR 498
+P+ S R SP APRRR++ R R P + P RR
Sbjct: 469 SPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRR 521
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 323 GKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKL 439
GKA + L+ + N++ + E +R+ D+ K+ T +H K+
Sbjct: 359 GKALQTLKTVQTNVQDSNESIRRGENDMLKEITDVHSKV 397
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Frame = +2
Query: 140 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ-VSELSNSLQGALTD 316
+++L+K D + + E N + N + L +A K D+MV + EL ++GA +
Sbjct: 536 IENLQKELSD-RDILLESQNEKIGDMNRD-LVQAKKRLDDAMVDKGTDELRRDVEGARNE 593
Query: 317 ANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEV 493
K V ++NL T + + D + T + + N+ K +
Sbjct: 594 VEKLLKMVHSLEKENLTLTAQCKQLKRDDTPRAGTTSAPSAPGTLTRSTSAQNNMHKRI 652
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = +2
Query: 179 TISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDAN-----GKAKEVL 343
T SE+ N K T+S N+ + S+ Q E + + D + G+ ++L
Sbjct: 170 TESEKKLKETNGKVTKSRNQLSERVSELEAQLKREADTAQKPKQADPDLLNKVGRLNDLL 229
Query: 344 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEV 493
+QN E++ K ++E + +KL + +KE KE+
Sbjct: 230 TSEKQNTRVLQEEVAKFKAELESTNKTMKQKLVHERKTLIKEKLEQGKEI 279
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 2.7
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Frame = +2
Query: 137 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT- 313
+L + E+ A Q+T SE+ N + +++ + N LKE + + + S Q ALT
Sbjct: 68 MLDEAEEKASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTR 127
Query: 314 --DANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT--ALHEKLQTGIQNTLKESQNL 481
D N K ++ + + L + ++EK T HE ++ + E
Sbjct: 128 ISDENTKLQKDCHELESIRQCAQFALDNCNEELEKTQTENEEHESRIETLEREVCEKDIA 187
Query: 482 AKEVGVNLDQTS 517
K++ D+ S
Sbjct: 188 MKDIVERKDEIS 199
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.7 bits (61), Expect = 2.7
Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 131 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTES------LNKALKEGSDSMVQQVSELSN 292
N ++ +K ++F+K + N+I+ ++ S N ++ D+ +Q+++E
Sbjct: 67 NRKAENYQKKWKNFEKESILKLNSIMEKISSHSQPSHHHTNASITLPYDATIQKIAEKEK 126
Query: 293 SLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQ 442
+L L + + L++ + + E+T L K +EK L E+ Q
Sbjct: 127 NLSKLLKELS-IVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQ 175
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 255 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 341
PT WC+ S S+P ++R R P +T +C
Sbjct: 78 PTDWCAISGSFPIMFR-RYPEETTADAQC 105
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 255 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 341
PT WC+ S S+P ++R R P +T +C
Sbjct: 93 PTDWCAISGSFPIMFR-RYPEETTADAQC 120
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 343 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 456
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 343 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 456
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical
protein C30G4.4a protein.
Length = 111
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEG--SRRQPGSDL 516
P SP G H+ P A ++ E +R +R ++ HP + +P G +++P S L
Sbjct: 34 PYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSGIPVQQRPASHL 92
>U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical
protein C30G4.4b protein.
Length = 192
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 343 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEG--SRRQPGSDL 516
P SP G H+ P A ++ E +R +R ++ HP + +P G +++P S L
Sbjct: 60 PYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSGIPVQQRPASHL 118
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +2
Query: 332 KEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQ 511
+++L +R+ + +D K H +K A L ++LQ + LKE + +EV + +
Sbjct: 195 EKMLSPSRRRGHKDDDDFGKRHEMKQKHAEELRQQLQEAKASKLKELTSRVEEVRMKQEA 254
Query: 512 TSQK 523
++
Sbjct: 255 LKER 258
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +2
Query: 335 EVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQT 514
E++++ R+N+ VED D+++ +L ++L+ Q L+ N+ +E +DQ
Sbjct: 236 ELVKEERENIRLLVEDKEDEVADLKQDTESLQKQLEEN-QEELEIVGNMLREEQGKVDQL 294
Query: 515 SQK 523
++
Sbjct: 295 QKR 297
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 27.9 bits (59), Expect = 4.7
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 173 QKTISEQFNAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 346
++ + Q+N+ V +N E K++++ ++ +++L L+ KEV Q
Sbjct: 54 RENMLRQWNSSVAERNAAEEIHRKSVEKFNEEHKTYMAKLEKQLEKINEKGEQDVKEVEQ 113
Query: 347 QARQNLERTVEDLRKAHPDVEKQATALHEKL--QTGIQNTLK-ESQNLAKEVGVNLDQTS 517
Q + E+ EDL K H + + ++++ Q Q+ LK E N + +L Q
Sbjct: 114 QRVKLEEQRTEDLVKHHESMANLSEKKYKEIEKQRVEQHMLKMEELNAKSKQNTSLYQIQ 173
Query: 518 QK 523
K
Sbjct: 174 MK 175
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +2
Query: 209 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 388
++ N NKAL + + Q++ E+SN ++ A + R+ V+++
Sbjct: 105 SNSNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEIT 164
Query: 389 K 391
K
Sbjct: 165 K 165
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 364 GAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQPGS 510
G H +G PQ P H +R PEH G P P + P S
Sbjct: 126 GHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRPQAPAAPPPKS 174
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 182 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK-EVLQQ 349
I+ N + N + + + KALKE + Q+S+L+ LQG L + + + K E LQQ
Sbjct: 250 IASMKNCLKNEE-IQKMQKALKEKDE----QISKLTEQLQGLLINRDKETKVEDLQQ 301
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1099 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 415
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1157 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1185
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 415
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 6.2
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +2
Query: 146 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 325
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 326 KAKEVLQQARQNLERTVEDLRKAHPDVEKQ 415
+ KE +A +NL+ +DLR ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U53139-13|AAK18939.1| 334|Caenorhabditis elegans Hypothetical
protein F18E3.7a protein.
Length = 334
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 511 LIQVDADFLRQVLALL*CVLDAGLQLLV*CGGLFLDVGVRLAEILDCALQVLASLLE 341
L++ +F +Q + L V DAG ++V C GL+ G +LA D + +LE
Sbjct: 154 LLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLY---GGKLAGDDDTCYPIRGVILE 207
>AB275892-1|BAF34315.1| 334|Caenorhabditis elegans D-aspartate
oxidase protein.
Length = 334
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 511 LIQVDADFLRQVLALL*CVLDAGLQLLV*CGGLFLDVGVRLAEILDCALQVLASLLE 341
L++ +F +Q + L V DAG ++V C GL+ G +LA D + +LE
Sbjct: 154 LLEQKIEFKQQEVTSLDAVADAGYDVIVNCAGLY---GGKLAGDDDTCYPIRGVILE 207
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 27.1 bits (57), Expect = 8.2
Identities = 21/95 (22%), Positives = 45/95 (47%)
Frame = +2
Query: 197 NAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTV 376
+A+V + E +K +E + V + ++ + + +GKA+E + ++E
Sbjct: 481 DAVVKGEVVEK-DKKSEEAREIEAIDVDDGDADVKQEVVEKDGKAEEAPEHEAMDVEDDD 539
Query: 377 EDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNL 481
EDL + P +E + E L T + + KE+ ++
Sbjct: 540 EDLDETIP-LESDEQMMDENLDTSVASK-KEAMDV 572
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/71 (21%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 122 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNS 295
+AP D+E +D +TI + + + +N ++ + KE D + ++++ N+
Sbjct: 526 EAPEHEAMDVEDDDEDLDETIPLESDEQMMDENLDTSVASKKEAMDVDELSNKMTDAVNN 585
Query: 296 LQGALTDANGK 328
LQ ++T++ +
Sbjct: 586 LQKSITESTNE 596
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 27.1 bits (57), Expect = 8.2
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 364
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 801 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 859
Query: 365 ERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQTSQK 523
ER + + + D+E++ + + + +Q ++ E ++L V D+ K
Sbjct: 860 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVEDELVSK 911
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 27.1 bits (57), Expect = 8.2
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 364
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 365 ERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQTSQK 523
ER + + + D+E++ + + + +Q ++ E ++L V D+ K
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVEDELVSK 913
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 27.1 bits (57), Expect = 8.2
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +2
Query: 188 EQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLE 367
E +A + ++NT K +GS S V+ + L ++ + +A +A + R+
Sbjct: 1113 ESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEATSRAMTAEVEMRRLRA 1172
Query: 368 RTVEDLRKAHPDVEKQATALHEKLQTG---IQNTLKESQNLAKEVGVNLDQTS 517
T E R + + K EK+ T ++ ++E+++ ++ +D+ S
Sbjct: 1173 ETAEYERGRNELLRKIRDLETEKIATTAALVEKAVEEAEDEGRDPLGTIDEPS 1225
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.1 bits (57), Expect = 8.2
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +2
Query: 215 KNTESLNKALKEGSDSMVQQVSEL---SNSLQGALTDANGKAKEVLQQAR-------QNL 364
+ T+ + K LK + Q+ EL S SL+ + N K + + + R +NL
Sbjct: 803 EKTQEIEK-LKSAVTATTQERDELTATSESLRTECENLNSKIQSIEESRRHAEEKGSENL 861
Query: 365 ERTVEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQTSQK 523
ER + + + D+E++ + + + +Q ++ E ++L V D+ K
Sbjct: 862 ERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVEDELVSK 913
>AF043702-1|AAK21499.1| 319|Caenorhabditis elegans Hypothetical
protein W03D8.9 protein.
Length = 319
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 374 VEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLDQTSQ 520
V+D+++A + ++ATAL + IQ + Q+ +E+ L +T Q
Sbjct: 59 VQDIQQAAEGLRQRATALQQDGPAQIQQMQSQIQSQTQEILSALQETQQ 107
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 27.1 bits (57), Expect = 8.2
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Frame = +2
Query: 173 QKTISEQFNAIVNSKNTESLNKALKEGSDSMV--QQVSELSNSLQGALTDANGKAKEVLQ 346
QK EQ I + + K +E + +++ L + + L + + +E ++
Sbjct: 185 QKLYEEQCRQIEKERKEQEERKRKQELEEQRKRNEELKRLRIAEEKRLLEEQQRLREQME 244
Query: 347 QAR----QNLERT--VEDLRKAHPDVEKQATALHEKLQTGIQNTLKESQNLAKEVGVNLD 508
+ R + LE +ED R+ D+E Q A+ +K+Q + E + E+
Sbjct: 245 RERLAEIKRLEEAARLEDERRIAADIEAQKQAMLQKMQAEQNKHIAEVERQRSELEERFA 304
Query: 509 QTSQ 520
+ SQ
Sbjct: 305 RVSQ 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,259,176
Number of Sequences: 27780
Number of extensions: 231653
Number of successful extensions: 1173
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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