Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K05
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 331 1e-90
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 331 1e-90
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 331 1e-90
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 330 3e-90
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 328 1e-89
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 328 1e-89
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 257 2e-68
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 249 7e-66
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 72 2e-12
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 2.5
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.5
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.5
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.5
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.5
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 331 bits (813), Expect = 1e-90
Identities = 154/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 330 bits (810), Expect = 3e-90
Identities = 153/203 (75%), Positives = 180/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 328 bits (805), Expect = 1e-89
Identities = 154/203 (75%), Positives = 178/203 (87%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 328 bits (805), Expect = 1e-89
Identities = 153/203 (75%), Positives = 179/203 (88%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 552
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 553 SPFSYGLVVKQVYDSGTIFAPAI 621
SPFS+GLV++QV+D+G+I+ P +
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEV 203
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 257 bits (630), Expect = 2e-68
Identities = 121/155 (78%), Positives = 136/155 (87%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 477
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 249 bits (609), Expect = 7e-66
Identities = 119/155 (76%), Positives = 135/155 (87%)
Frame = +1
Query: 13 MGMEDKATWKSNYFVKIIQLLDEYPKCFIVGADNVCSQQMQQIRISLRGHSIVLMGKNTM 192
M ED+ATWKSNYF+KIIQLLD+YPKCFIVGADNV S+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 193 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 372
MRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 373 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 477
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 71.7 bits (168), Expect = 2e-12
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +1
Query: 496 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAI 621
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ P +
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEV 43
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 273 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 605 MVPESYTCLTTRPYEKGEMFNMLRRVASEAPTLSPGFRIWTSL 477
M +S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 238 MTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,169,577
Number of Sequences: 237096
Number of extensions: 2467878
Number of successful extensions: 5194
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5193
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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