Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_K04
(545 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 30 0.013
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.16
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.2
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 24 1.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 1.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 3.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 3.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.2
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.013
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -3
Query: 432 SSTSKPVLYFVRSARYRNIGR--CRC 361
S+T P+LY V SA+YRN + CRC
Sbjct: 308 STTINPILYNVMSAKYRNAFKETCRC 333
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 26.6 bits (56), Expect = 0.16
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 256 PVYKPESSTELTIPSSTQETTTKRQ 330
PV KP + + P+ST+ETT K++
Sbjct: 770 PVIKPANVNKEQSPNSTKETTPKKE 794
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 268 PESSTELTIPSSTQETTTKRQIRRRRPNHSYTS 366
P +T L+ SST K Q + + NH YTS
Sbjct: 94 PGDATGLSNRSSTSSNDPKNQYKNQNNNH-YTS 125
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 432 SSTSKPVLYFVRSARYRN 379
S+T P+LY + S +YRN
Sbjct: 320 STTINPILYNLMSIKYRN 337
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 76 RQYHQASTESSRVKLERKR 132
R+Y + S E SR ++ER+R
Sbjct: 290 RKYRETSKERSRDRIERER 308
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 256 PVYKPESSTEL--TIPSSTQETTT 321
P++ P SST L TI ++T TTT
Sbjct: 93 PLHPPASSTSLPATITTTTTTTTT 116
Score = 21.4 bits (43), Expect = 6.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 247 YKHPVYKPESSTELTIPSSTQETTTKRQIRRRRPNHSYTSTSSDISVTRRPYEV 408
+ HP +T +T ++T TTT PN T+ + S T P +V
Sbjct: 645 HSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPN-----TTQNASATTPPPQV 693
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 2.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 293 SHHLHKKPQQNVKSGEGDQI 352
S H H+ P QN S DQ+
Sbjct: 628 SPHFHQSPSQNHSSAVPDQM 647
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 221 TCLVFKSASISSI 183
TCLVF S S+S +
Sbjct: 148 TCLVFSSGSVSCV 160
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 76 RQYHQASTESSRVKLERKR 132
R+Y + S E SR ++ER+R
Sbjct: 279 RKYGKTSKERSRDRMERER 297
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.7
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 283 ELTIPSSTQETTTKRQIRRRRPNHSYTSTSSDISVTRRPYEVKNRF 420
+L P + TTT + + +S SVT P++ K RF
Sbjct: 317 KLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRF 362
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 352 HSYTSTSSDISVTRRPYEVKNRFRGRR 432
H +STSSDIS + R R R
Sbjct: 1820 HGTSSTSSDISPMSEQKSLPRRGRSSR 1846
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 352 HSYTSTSSDISVTRRPYEVKNRFRGRR 432
H +STSSDIS + R R R
Sbjct: 1816 HGTSSTSSDISPMSEQKSLPRRGRSSR 1842
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.126 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,948
Number of Sequences: 438
Number of extensions: 2401
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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