Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_J23
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S45630-1|AAB23453.1|  175|Homo sapiens alpha B-crystallin protein.     32   1.8  
M28638-1|AAA52104.1|  175|Homo sapiens protein ( Human alpha-B-c...    32   1.8  
M24906-1|AAA60267.1|   69|Homo sapiens alpha-B-crystallin protein.     32   1.8  
BT006770-1|AAP35416.1|  175|Homo sapiens crystallin, alpha B pro...    32   1.8  
BC007008-1|AAH07008.1|  175|Homo sapiens crystallin, alpha B pro...    32   1.8  
AF007162-1|AAC19161.1|  194|Homo sapiens unknown protein.              32   1.8  

>S45630-1|AAB23453.1|  175|Homo sapiens alpha B-crystallin protein.
          Length = 175

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 108 QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149


>M28638-1|AAA52104.1|  175|Homo sapiens protein ( Human
           alpha-B-crystallin gene, 5' end. ).
          Length = 175

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 108 QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149


>M24906-1|AAA60267.1|   69|Homo sapiens alpha-B-crystallin protein.
          Length = 69

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 2   QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 43


>BT006770-1|AAP35416.1|  175|Homo sapiens crystallin, alpha B
           protein.
          Length = 175

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 108 QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149


>BC007008-1|AAH07008.1|  175|Homo sapiens crystallin, alpha B
           protein.
          Length = 175

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 108 QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149


>AF007162-1|AAC19161.1|  194|Homo sapiens unknown protein.
          Length = 194

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 196 QEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGAR 321
           Q+E GF+SR F R + +PA    ++  SS  +D  L V G R
Sbjct: 108 QDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,268,906
Number of Sequences: 237096
Number of extensions: 1888440
Number of successful extensions: 4454
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4454
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)