Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J23
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 32 0.27
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 32 0.27
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 30 1.1
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 30 1.1
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 30 1.1
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 30 1.1
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 30 1.1
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 30 1.1
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 1.5
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 1.5
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical p... 29 3.3
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 3.3
Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 28 5.9
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 28 5.9
U53339-1|AAA96197.3| 199|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 DRTPIIENSSVNG-SQEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGARTLR 330
D ++EN+ + Q + TFPRS TN AV+A ++ T +P A T+R
Sbjct: 391 DEVVVVENTGQDWFGQNKKNQKFGTFPRSVVFAQTNNAVAAATAV-TPQKVPT--APTIR 447
Query: 331 VWQRAPPVLPPVSALKRVLTITRPSTED 414
+ PP PP + LK + T+ S D
Sbjct: 448 I----PPSHPPPAPLKPLNNNTKTSLND 471
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 154 DRTPIIENSSVNG-SQEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGARTLR 330
D ++EN+ + Q + TFPRS TN AV+A ++ T +P A T+R
Sbjct: 391 DEVVVVENTGQDWFGQNKKNQKFGTFPRSVVFAQTNNAVAAATAV-TPQKVPT--APTIR 447
Query: 331 VWQRAPPVLPPVSALKRVLTITRPSTED 414
+ PP PP + LK + T+ S D
Sbjct: 448 I----PPSHPPPAPLKPLNNNTKTSLND 471
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 0.83
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 306 CGRCANSSRMATCAARSTTSLCVKTC 383
C R NS +TC++ ST S+C+ C
Sbjct: 226 CERSCNSGCRSTCSSTSTLSVCIPAC 251
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 272 LVHPADMMIVSKSMKELFAKGHIRTPYY 299
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 272 LVHPADMMIVSKSMKELFAKGHIRTPYY 299
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 376 LVHPADMMIVSKSMKELFAKGHIRTPYY 403
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 376 LVHPADMMIVSKSMKELFAKGHIRTPYY 403
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 272 LVHPADMMIVSKSMKELFAKGHIRTPYY 299
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 272 LVHPADMMIVSKSMKELFAKGHIRTPYY 299
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 376 LVHPADMMIVSKSMKELFAKGHIRTPYY 403
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 376 LVHPADMMIVSKSMKELFAKGHIRTPYY 403
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 56 LVHPADMMIVSKSMKELFAKGHIRTPYY 83
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 275 IVHTQQTMVCLWAVRELFAYGNVRRPFY 358
+VH M+ +++ELFA G++R P+Y
Sbjct: 272 LVHPADMMIVSKSMKELFAKGHIRTPYY 299
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 52 SDSLYPSGIWDQMKINQAGNLSRAVSSAIPAYYSDRTPIIENSSVNGSQEE 204
S+++YP IW + Q G+L A+ YY + + + ++ ++E+
Sbjct: 229 SENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGRTIEEAKED 279
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 52 SDSLYPSGIWDQMKINQAGNLSRAVSSAIPAYYSDRTPIIENSSVNGSQEE 204
S+++YP IW + Q G+L A+ YY + + + ++ ++E+
Sbjct: 229 SENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGRTIEEAKED 279
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 52 SDSLYPSGIWDQMKINQAGNLSRAVSSAIPAYYSDRTPIIENSSVNGSQEE 204
S+++YP IW + Q G+L A+ YY + + + ++ ++E+
Sbjct: 248 SENVYPKKIWMPNEGVQRGSLMHGDGDALSPYYPSKKELFKGRTIEEAKED 298
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Frame = +1
Query: 4 RGSGTRPGSGDYARETSDSLYPSGIWDQMKINQAGNLSRAVSSAIPAYYSDRTPIIENSS 183
+GS T +G + S S + N + S+A + A P YS + + S
Sbjct: 978 QGSSTEGNTGSTTVNSQSSSVASTVASSTS-NIVSSTSQAPTCASP--YSGKIATVFELS 1034
Query: 184 VNGSQEELGFMSRTFPRS------HALPATNMAVSADSSYPTDYGLPVGGARTL 327
N + + F++ S A N+ SYPT+ L GGA++L
Sbjct: 1035 ANSATNVVNFVTNNLYNSVNYDFTSTTQAINVPYGQTDSYPTNKFLQYGGAKSL 1088
>Z81041-12|CAE17708.2| 81|Caenorhabditis elegans Hypothetical
protein C27A7.8 protein.
Length = 81
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 306 CGRCANSSRMATCAARSTTSLC 371
CG C R TC STT C
Sbjct: 23 CGNCGTQQRTRTCTGASTTCTC 44
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 151 SDRTPII-ENSSVNGSQEELGFMSRTFPRSHALPATNMAVSADSSYPTDYGLPVGGARTL 327
S TP+ +N + + + E + + P+S P TN S T+ LP+ A T
Sbjct: 250 STTTPVATQNPTTSNQKNETTDEATSSPQSAKTPVTNPTTSPQKPDTTEAALPLTTATTT 309
Query: 328 RVWQRAPPVLPPVSALKRVLTITRPS 405
+ Q + + ++ L IT S
Sbjct: 310 KATQTSHRPAESIIQPEQELPITETS 335
>Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical
protein C27A7.9 protein.
Length = 95
Score = 28.3 bits (60), Expect = 4.4
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +3
Query: 303 ACGRCANSSRMATCAARSTTSLC 371
+CG C N +R +C++++ + +C
Sbjct: 36 SCGNCGNQTRARSCSSQTASCIC 58
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 37 YARETSDSLYPSGIWDQMKI 96
+ E + +YP+G+WDQ+ I
Sbjct: 270 FVHEKATFIYPAGVWDQLNI 289
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 27.9 bits (59), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 37 YARETSDSLYPSGIWDQMKI 96
+ E + +YP+G+WDQ+ I
Sbjct: 270 FVHEKATFIYPAGVWDQLNI 289
>U53339-1|AAA96197.3| 199|Caenorhabditis elegans Hypothetical
protein F58A6.2 protein.
Length = 199
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 239 TRYRRPTWRYQLIVHTQQTMVCLWAVRELFAYGNV 343
T++ P + Y L + + L AV ELF+ GN+
Sbjct: 86 TQWLMPAFAYHLFIAVLNAITSLIAVGELFSEGNI 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010,905
Number of Sequences: 27780
Number of extensions: 299006
Number of successful extensions: 811
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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