Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J11
(156 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 20 3.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 3.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 4.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 4.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 19 5.6
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 19 5.6
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 19 5.6
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 19 5.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 19 7.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 18 9.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 18 9.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 18 9.8
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 19.8 bits (39), Expect = 3.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 79 PWPRPPGDTLQRRLPS 126
P PRPP L+R S
Sbjct: 79 PQPRPPHPRLRREAES 94
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 51 PQPRPPHPRLRR 62
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 107 PQPRPPHPRLRR 118
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 133 PQPRPPHPRLRR 144
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 19.8 bits (39), Expect = 3.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 115 FAVEYPPVGGATVGSAPADALRHYN 41
F ++P V VGS A + YN
Sbjct: 206 FTTDHPSVAYLLVGSLKGIARQFYN 230
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.4 bits (38), Expect = 4.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 88 RPPGDTLQRRLPSYTIR 138
+PP DT L S TIR
Sbjct: 1083 QPPHDTTCTTLTSQTIR 1099
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.4 bits (38), Expect = 4.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 95 RGILYSEDCLP 127
R I +SE CLP
Sbjct: 428 REIAFSESCLP 438
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 50 PQPRPPHPRLRR 61
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 78 PQPRPPHPRLRR 89
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 134 PQPRPPHPRLRR 145
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 190 PQPRPPHPRLRR 201
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 218 PQPRPPHPRLRR 229
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 246 PQPRPPHPRLRR 257
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 51 PQPRPPHPRLRR 62
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 79 PQPRPPHPRLRR 90
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 107 PQPRPPHPRLRR 118
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 99 GYSTAKIAFL 128
GY+TA +AF+
Sbjct: 182 GYNTASVAFV 191
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 22 PQPRPPHPRLRR 33
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 50 PQPRPPHPRLRR 61
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 78 PQPRPPHPRLRR 89
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 106 PQPRPPHPRLRR 117
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 134 PQPRPPHPRLRR 145
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 79 PWPRPPGDTLQR 114
P PRPP L+R
Sbjct: 162 PQPRPPHPRLRR 173
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 18.6 bits (36), Expect = 7.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 149 LYILLIV*EGNLRCRVSP 96
LYI+LI E N+R + P
Sbjct: 902 LYIILIRPERNVRQSMMP 919
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 46 YNVTHNALHTYLS 8
YN H+ LHT S
Sbjct: 93 YNGKHSYLHTITS 105
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 149 LYILLIV*EGNLRCRVSPGGR 87
+YI+L + N+R +V+ G +
Sbjct: 760 IYIILFQPDKNIRRKVTMGDK 780
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 149 LYILLIV*EGNLRCRVSPGGR 87
+YI+L + N+R +V+ G +
Sbjct: 850 IYIILFQPDKNIRRKVTMGDK 870
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,090
Number of Sequences: 438
Number of extensions: 998
Number of successful extensions: 27
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used: 2655300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -