Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J09
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 209 5e-55
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 209 5e-55
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 209 5e-55
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 209 5e-55
03_01_0034 + 318432-318825,318902-319851 208 8e-55
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 208 1e-54
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 208 1e-54
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 208 1e-54
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 103 5e-23
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 99 6e-22
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 99 6e-22
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 99 1e-21
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 71 4e-13
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 29 0.92
06_03_1045 - 27111771-27112097,27112205-27112330,27112434-271126... 29 1.2
12_02_0292 + 16979550-16980662,16983249-16983731 29 1.6
12_01_1029 + 10547341-10548108 29 1.6
08_02_0787 - 21200762-21201142 28 2.8
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 28 2.8
04_03_0737 - 19152942-19154930 27 3.7
12_02_0559 - 20462217-20462780 27 4.9
12_02_0558 - 20453998-20454561 27 4.9
11_06_0764 + 27108979-27110018,27110176-27112270 27 4.9
11_06_0216 - 21345865-21346152,21347153-21347297,21348311-213483... 27 4.9
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 27 4.9
04_03_0739 + 19180048-19182039 27 4.9
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 27 6.5
03_02_0711 - 10591738-10591772,10592260-10592447,10593730-105938... 27 6.5
01_05_0184 + 19005991-19006129,19006523-19006692,19007408-19007659 27 6.5
01_01_0985 - 7788318-7789571 27 6.5
12_02_0830 + 23525574-23525662,23525738-23526188 26 8.6
10_07_0062 - 12499872-12501350 26 8.6
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 26 8.6
01_06_1606 + 38587709-38588002 26 8.6
01_06_1362 - 36677281-36677574,36677661-36677959,36678435-366785... 26 8.6
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 209 bits (511), Expect = 5e-55
Identities = 95/120 (79%), Positives = 108/120 (90%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQ
Sbjct: 221 TFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 209 bits (511), Expect = 5e-55
Identities = 95/120 (79%), Positives = 108/120 (90%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQ
Sbjct: 221 TFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 209 bits (511), Expect = 5e-55
Identities = 95/118 (80%), Positives = 107/118 (90%)
Frame = +3
Query: 24 GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYR 203
GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR
Sbjct: 239 GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 298
Query: 204 ALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
ALTVPELTQQM+DAKN+M A DPRHGR LT + +FRGRMS EVDEQ++N+ NKNSSY
Sbjct: 299 ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSY 356
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 209 bits (511), Expect = 5e-55
Identities = 95/120 (79%), Positives = 108/120 (90%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQ
Sbjct: 221 TFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 208 bits (509), Expect = 8e-55
Identities = 94/118 (79%), Positives = 107/118 (90%)
Frame = +3
Query: 24 GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYR 203
GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR
Sbjct: 223 GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 282
Query: 204 ALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
ALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 283 ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 208 bits (508), Expect = 1e-54
Identities = 94/118 (79%), Positives = 107/118 (90%)
Frame = +3
Query: 24 GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYR 203
GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR
Sbjct: 403 GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 462
Query: 204 ALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
ALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 463 ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 520
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 208 bits (508), Expect = 1e-54
Identities = 94/118 (79%), Positives = 107/118 (90%)
Frame = +3
Query: 24 GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYR 203
GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR
Sbjct: 244 GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 303
Query: 204 ALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
ALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 304 ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 361
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 208 bits (508), Expect = 1e-54
Identities = 94/118 (79%), Positives = 107/118 (90%)
Frame = +3
Query: 24 GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYR 203
GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYR
Sbjct: 223 GDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR 282
Query: 204 ALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
ALTVPELTQQM+DAKN+M A DPRHGR LT + +FRG+MS EVDEQ++N+ NKNSSY
Sbjct: 283 ALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 103 bits (247), Expect = 5e-23
Identities = 44/118 (37%), Positives = 73/118 (61%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF +S +AP+ S
Sbjct: 223 TYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ L+VPE+T +F+ ++MA CDPRHG+ + ++RG + +V+ + I K +
Sbjct: 283 HEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT 340
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 99 bits (238), Expect = 6e-22
Identities = 44/118 (37%), Positives = 70/118 (59%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF +S +AP+ S
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ L+V E+T F+ ++MA CDPRHG+ + ++RG + +V+ + I K +
Sbjct: 283 HEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT 340
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 99 bits (238), Expect = 6e-22
Identities = 44/118 (37%), Positives = 70/118 (59%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF +S +AP+ S
Sbjct: 223 TYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAY 282
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ L+V E+T F+ ++MA CDPRHG+ + ++RG + +V+ + I K +
Sbjct: 283 HEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRT 340
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/118 (35%), Positives = 73/118 (61%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF +S +AP+ S
Sbjct: 304 TYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAF 363
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ +VPE+T +F+ ++MA CDPRHG+ + ++RG + +V+ + +I + +
Sbjct: 364 HEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRT 421
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 70.5 bits (165), Expect = 4e-13
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLT-SRGSQ 194
T N LVS MS TT LR+PG +N DL L +++P PR HF ++G+ PLT R
Sbjct: 224 TFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVN 283
Query: 195 QYRALTVPELTQQMFDAKNLMAACDPRH-----GR*LTVATIFRGRMSLHEVDEQIMNI 356
R TV ++ +++ KN+M + R+ + +++ I +G + +V E + I
Sbjct: 284 MIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRI 342
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 29.5 bits (63), Expect = 0.92
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 317 ATAEDGCDGELAPVTRVTRRHQVLSVEHLLRELGDGERAVLLTAAGCEGS 168
A AE + R+ H L +++GDG LTA CEGS
Sbjct: 1996 AVAETAATANASSSKRLQNEHTQLHHHQQQQQVGDGSVDSCLTACDCEGS 2045
>06_03_1045 -
27111771-27112097,27112205-27112330,27112434-27112673,
27113343-27113429,27113520-27113652,27113711-27113820,
27114308-27114424,27114526-27114610,27114693-27114796,
27115530-27115612,27115729-27115819
Length = 500
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 326 QGHATAEDGCDGELAPVTRVTRRHQVLSVEHLLRELGDGERAVLLTAAG 180
Q HA A CD EL R + S+ +R G GE VL++ AG
Sbjct: 391 QKHAAAATPCDAELTSRLERATRSTISSMAAGVRRAG-GETPVLMSGAG 438
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 206 RAVLLTAAGCEGSETRNKKVQTWEWHH 126
R V+ T+AG G+ R + ++W HH
Sbjct: 488 RKVVATSAGAPGTRQRRPEAKSWRQHH 514
>12_01_1029 + 10547341-10548108
Length = 255
Score = 28.7 bits (61), Expect = 1.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 200 VLLTAAGCEGSETRNKKVQTWEWHH 126
V+ T+AG +G+ R + ++W HH
Sbjct: 157 VVATSAGAQGTRQRRAEAESWRQHH 181
>08_02_0787 - 21200762-21201142
Length = 126
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 320 HATAEDGCDGELAPVTRVTRRHQVLSVE 237
H E G DGE A VTR+ RR V + E
Sbjct: 99 HQVVEVGDDGEGAAVTRLRRRRMVRTCE 126
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 27.9 bits (59), Expect = 2.8
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 39 LVSLTMSGVTTCLRFPGQLNAD--LRKLAVNMVPFP-RLHFFISGFAPLTSRGSQQYRAL 209
L + M V L++ G LN D L + + V F R+H F GF P T ++ R L
Sbjct: 731 LAKMYMKRVAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPETMDAFEELRNL 790
>04_03_0737 - 19152942-19154930
Length = 662
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 278 VTRVTRRHQVLSVEHLLRELGDGERAVLLTAAGCEGS 168
++R+ + ++ ++R +GD ER VL GC S
Sbjct: 269 ISRLPKPPSANLLDEVIRLVGDAERPVLYVGGGCSAS 305
>12_02_0559 - 20462217-20462780
Length = 187
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 200 VLLTAAGCEGSETRNKKVQTWEWHH 126
V+ T+AG G+ R + ++W HH
Sbjct: 46 VVATSAGAPGTRQRRPEAKSWRQHH 70
>12_02_0558 - 20453998-20454561
Length = 187
Score = 27.1 bits (57), Expect = 4.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 200 VLLTAAGCEGSETRNKKVQTWEWHH 126
V+ T+AG G+ R + ++W HH
Sbjct: 46 VVATSAGAPGTRQRRPEAKSWRQHH 70
>11_06_0764 + 27108979-27110018,27110176-27112270
Length = 1044
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 39 LVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFP 140
L +TM+G+ C P + N+D KL ++ P+P
Sbjct: 453 LAIVTMAGLVACN--PNKANSDWSKLCESLFPYP 484
>11_06_0216 -
21345865-21346152,21347153-21347297,21348311-21348360,
21348564-21348938,21349717-21349842
Length = 327
Score = 27.1 bits (57), Expect = 4.9
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -3
Query: 281 PVTRVTRRHQVLSVEHLLRELGDGERAVL----LTAAGCEGSETRNKKVQTWEWHHVHSQ 114
P+ RV HQ+ S H L EL VL L A E ++KK + W
Sbjct: 181 PILRVA--HQMASTAHGLAELPLLILLVLIMMNLMVAASTVQEKKDKKPLSKAW------ 232
Query: 113 LAEIRIQLTGEPEAGGNTRHGQR 45
A I+ +AGG++RHG+R
Sbjct: 233 -AMFFIEFRRRVQAGGDSRHGKR 254
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 90 DRGT*GRW*HQTWSATPGGSSRPSCRIPAA 1
D G GR H + TPGG SR R PAA
Sbjct: 104 DMGGLGRLVHTPVAGTPGGKSRRLGRQPAA 133
>04_03_0739 + 19180048-19182039
Length = 663
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 278 VTRVTRRHQVLSVEHLLRELGDGERAVLLTAAGCEGS 168
++R+ + ++ ++R +GD ER VL GC S
Sbjct: 265 ISRLPKPPAANLLDEVIRLVGDAERPVLYVGGGCSAS 301
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 42 VSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFA 170
+S+T+ G R P ++ DL+K VN+ PRL +A
Sbjct: 137 MSVTVVGTVEGGRPPTKIKTDLKKPVVNLACHPRLPVLYVAYA 179
>03_02_0711 -
10591738-10591772,10592260-10592447,10593730-10593872,
10593973-10594098,10594187-10594294,10594401-10594618,
10594719-10595208
Length = 435
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 72 CLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRALTVPELTQQMFDAKN 251
CLR PG ++ AV +P R+ +SGF + G + L + Q+FD N
Sbjct: 56 CLRVPGDPSSAFSVFAVRALPPCRVSGLVSGFR--DADGVSGF-VLVLGSAVWQVFDGHN 112
Query: 252 LMAA 263
++A
Sbjct: 113 GVSA 116
>01_05_0184 + 19005991-19006129,19006523-19006692,19007408-19007659
Length = 186
Score = 26.6 bits (56), Expect = 6.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 178 VRGAKPEIKKCKRGN--GTMFTASLRRSAFN*PGNLRQVVTPDMVSDTRWFKSP 23
V+G + CK+ + + T+S+ A+N G R TPD+V D WF P
Sbjct: 111 VKGTLNVLGSCKKASIRRVIVTSSMAAVAYN--GKPR---TPDVVVDETWFSVP 159
>01_01_0985 - 7788318-7789571
Length = 417
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 254 DGGV*PASRALTHRRNHLPRSHVPA 328
DG V P SR ++ R+ LPR +PA
Sbjct: 9 DGSVLPPSRIVSERQAGLPRRFMPA 33
>12_02_0830 + 23525574-23525662,23525738-23526188
Length = 179
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 87 RGT*GRW*HQTWSATPGGSS 28
RG GRW H W A GG++
Sbjct: 9 RGGGGRWLHAAWLALTGGAA 28
>10_07_0062 - 12499872-12501350
Length = 492
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 317 ATAEDGCDGELAPVTRVTRRHQVLSVEHLLRELGDGE 207
A AE G GEL + R R + VL LLR + E
Sbjct: 56 AAAEGGVSGELLDLLREARANAVLPAIGLLRRRKEAE 92
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 187 PRDVRGAKPEIKKCKRGNGT--MFTASLRRSA 98
P D + P +KKCK+ GT + T + RRSA
Sbjct: 402 PPDNISSIPSLKKCKKSKGTNVVITDTDRRSA 433
>01_06_1606 + 38587709-38588002
Length = 97
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 127 MFTASLRRSAFN*PGNLRQVVTPDMVSDTRWFKSP 23
M A+ RR G+ R+V PD TRW +P
Sbjct: 20 MEQAAARRRKTQPAGSKRKVPEPDTFCPTRWLPTP 54
>01_06_1362 -
36677281-36677574,36677661-36677959,36678435-36678524,
36678973-36679141,36679247-36679369,36680020-36680046
Length = 333
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 281 PVTRVTRRHQVLSVEHLLRELGDGERAVLLTA 186
P+ R RHQ L+ + LR+ DG+ V + A
Sbjct: 221 PIERGRGRHQRLTTQWALRKCRDGDAVVAMDA 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,441,114
Number of Sequences: 37544
Number of extensions: 225863
Number of successful extensions: 713
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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