Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J09
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 228 9e-61
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 221 1e-58
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 221 1e-58
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 220 3e-58
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 219 7e-58
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 218 1e-57
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 107 3e-24
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 107 3e-24
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 99 1e-21
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 99 1e-21
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 99 1e-21
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 99 1e-21
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 98 2e-21
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 98 2e-21
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 98 2e-21
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 98 2e-21
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 96 6e-21
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 96 6e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 96 6e-21
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 95 1e-20
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 89 1e-18
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 88 2e-18
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 87 4e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 87 4e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 38 0.003
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 38 0.003
Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical pr... 29 1.5
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical pr... 28 2.5
X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein p... 28 2.5
U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical pr... 28 2.5
U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 28 2.5
U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical pr... 27 5.9
U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical pr... 26 7.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 228 bits (558), Expect = 9e-61
Identities = 105/120 (87%), Positives = 114/120 (95%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPLTSRGSQQ
Sbjct: 221 TYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YR+LTVPELTQQMFDAKN+MAACDPRHGR LTVA +FRGRMS+ EVDEQ++N+ NKNSSY
Sbjct: 281 YRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSY 340
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 221 bits (541), Expect = 1e-58
Identities = 103/120 (85%), Positives = 110/120 (91%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPLTSR +QQ
Sbjct: 221 TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRA+TVPELTQQ FDAKN+MAACDPRHGR LT A IFRGRMS+ EVDEQ++NI NKNSSY
Sbjct: 281 YRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSY 340
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 221 bits (541), Expect = 1e-58
Identities = 103/120 (85%), Positives = 110/120 (91%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPLTSR +QQ
Sbjct: 221 TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQ 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRA+TVPELTQQ FDAKN+MAACDPRHGR LT A IFRGRMS+ EVDEQ++NI NKNSSY
Sbjct: 281 YRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSY 340
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 220 bits (537), Expect = 3e-58
Identities = 101/120 (84%), Positives = 112/120 (93%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPL+++G+Q
Sbjct: 221 TYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQA 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTV ELTQQMFDAKN+MAACDPRHGR LTVA +FRGRMS+ EVDEQ++N+ NKNSSY
Sbjct: 281 YRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSY 340
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 219 bits (534), Expect = 7e-58
Identities = 100/120 (83%), Positives = 112/120 (93%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVS+TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPL+++G+Q
Sbjct: 221 TYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQA 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTV ELTQQMFDAKN+MAACDPRHGR LTVA +FRGRMS+ EVD+Q+MN+ NKNSSY
Sbjct: 281 YRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSY 340
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 218 bits (532), Expect = 1e-57
Identities = 100/120 (83%), Positives = 112/120 (93%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF+ GFAPL+++G+Q
Sbjct: 221 TYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQA 280
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSSY 377
YRALTV ELTQQMFDAKN+MAACDPRHGR LTVA +FRGRMS+ EVDEQ++++ NKNSSY
Sbjct: 281 YRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSY 340
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 107 bits (257), Expect = 3e-24
Identities = 54/119 (45%), Positives = 79/119 (66%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHL SL +SG+TT RF G L D+RKL N PRLHFF++ FAP+ +G
Sbjct: 222 TYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIID 279
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSS 374
+A ++ +LTQQ+ DAKN+M C+ G+ L+ A I+RG+ + + EQI+++ N++ S
Sbjct: 280 CQAFSISDLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPS 337
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 107 bits (257), Expect = 3e-24
Identities = 54/119 (45%), Positives = 79/119 (66%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T GDLNHL SL +SG+TT RF G L D+RKL N PRLHFF++ FAP+ +G
Sbjct: 222 TYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIID 279
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNSS 374
+A ++ +LTQQ+ DAKN+M C+ G+ L+ A I+RG+ + + EQI+++ N++ S
Sbjct: 280 CQAFSISDLTQQVLDAKNIM-TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPS 337
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 98.7 bits (235), Expect = 1e-21
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF ++ F+P+ S +
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQ 285
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V E+T F+ N M CDPRHG+ + V +FRG + +V+ I I K S
Sbjct: 286 LSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRS 340
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 98.7 bits (235), Expect = 1e-21
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF ++ F+P+ S +
Sbjct: 225 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQ 284
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V E+T F+ N M CDPRHG+ + V +FRG + +V+ I I K S
Sbjct: 285 LSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRS 339
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 98.7 bits (235), Expect = 1e-21
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF ++ F+P+ S +
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQ 285
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V E+T F+ N M CDPRHG+ + V +FRG + +V+ I I K S
Sbjct: 286 LSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRS 340
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 98.7 bits (235), Expect = 1e-21
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN L+ +S +T LRF G LN DL + N+VP+PR+HF ++ F+P+ S +
Sbjct: 226 NLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQ 285
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V E+T F+ N M CDPRHG+ + V +FRG + +V+ I I K S
Sbjct: 286 LSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRS 340
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 98.3 bits (234), Expect = 2e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPRHG+ + V ++RG + +V+ I I K +
Sbjct: 284 LSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRT 338
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 98.3 bits (234), Expect = 2e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPRHG+ + V ++RG + +V+ I I K +
Sbjct: 284 LSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRT 338
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 98.3 bits (234), Expect = 2e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPRHG+ + V ++RG + +V+ I I K +
Sbjct: 284 LSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRT 338
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 98.3 bits (234), Expect = 2e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPRHG+ + V ++RG + +V+ I I K +
Sbjct: 284 LSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRT 338
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 96.3 bits (229), Expect = 6e-21
Identities = 45/118 (38%), Positives = 70/118 (59%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S S
Sbjct: 220 TYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLIS--SAH 277
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ L+V E+T+ F+A N M CDP+HG+ + V ++RG + +V I +I + S
Sbjct: 278 HEFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRS 335
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 96.3 bits (229), Expect = 6e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPR+G+ + V ++RG + +V+ I I K S
Sbjct: 284 LSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRS 338
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 96.3 bits (229), Expect = 6e-21
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN ++S +S +T LRF G LN DL + N+VP+PR+HF ++ + PL S + A
Sbjct: 224 NLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAYHEA 283
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
L+V ++T F+ N M CDPR+G+ + V ++RG + +V+ I I K S
Sbjct: 284 LSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRS 338
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 95.5 bits (227), Expect = 1e-20
Identities = 44/118 (37%), Positives = 69/118 (58%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN L++ +S VT LRF G LN DL + N+VP+PR+HF ++ +AP+ S
Sbjct: 228 TYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKAY 287
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ +TV E+TQQ F+ M CDPR G+ + ++RG + +V+ I ++ K S
Sbjct: 288 HEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRS 345
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/113 (34%), Positives = 66/113 (58%)
Frame = +3
Query: 27 DLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRA 206
+LN L++ +S +T LRF G LN DL + N+VP+PR+HF ++ +AP+ S +
Sbjct: 229 NLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEP 288
Query: 207 LTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNK 365
L+V ++T F+ N M CDP G+ + V ++RG + +V+ I ++ K
Sbjct: 289 LSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAK 341
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 88.2 bits (209), Expect = 2e-18
Identities = 40/114 (35%), Positives = 65/114 (57%)
Frame = +3
Query: 30 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRAL 209
LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 227 LNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQL 286
Query: 210 TVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+V E+T F+ + M CDPR+G+ + ++RG + E++ I I K +
Sbjct: 287 SVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRA 340
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 87.0 bits (206), Expect = 4e-18
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 229 TYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERAS 288
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ TV ++T F+ M CDPR G+ + V ++RG + +++ I + K +
Sbjct: 289 HEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRT 346
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 87.0 bits (206), Expect = 4e-18
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +3
Query: 18 TRGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQ 197
T +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 201 TYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERAS 260
Query: 198 YRALTVPELTQQMFDAKNLMAACDPRHGR*LTVATIFRGRMSLHEVDEQIMNIPNKNS 371
+ TV ++T F+ M CDPR G+ + V ++RG + +++ I + K +
Sbjct: 261 HEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRT 318
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +3
Query: 30 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRAL 209
+N LV+ MS T RF + +R L ++ PFP +HF S +P+ R
Sbjct: 230 INSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKT 287
Query: 210 TVPELTQQMFDAKNLMAACDPR 275
+V ++T+ + ++M + R
Sbjct: 288 SVADVTRFLLKPTSMMVSTASR 309
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +3
Query: 30 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPLTSRGSQQYRAL 209
+N LV+ MS T RF + +R L ++ PFP +HF S +P+ R
Sbjct: 230 INSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKT 287
Query: 210 TVPELTQQMFDAKNLMAACDPR 275
+V ++T+ + ++M + R
Sbjct: 288 SVADVTRFLLKPTSMMVSTASR 309
>Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical
protein F14F3.3 protein.
Length = 453
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 176 EGSETRNKKVQTWEWHHVHSQLAEIRIQLT 87
+G + N+ VQTW +VHS++ +R++ T
Sbjct: 313 DGMKAWNRSVQTWLALYVHSRVKVMRVETT 342
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 238 NICCVSSGTVSARYC*LPRDVRGAKPEIKKC 146
NI C + GTVS C P G E+ +C
Sbjct: 870 NIVCYNGGTVSGGQCVCPPGYAGESCEVPRC 900
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 62 CYHLPQVPRSVECGSPQAGC--EHGAIP-TFALFYFWFRSP 175
C H P + RS+ SP+ G + G + TF LF WF+SP
Sbjct: 498 CNH-PGIYRSLSPASPKFGSIKDSGKVEMTFKLFDDWFKSP 537
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 314 TAEDGCDGELAPVTRVTRRHQVLSVEHLLRELGDGERAVLLT--AAGCEGSETRNKK 150
T E+ DGE R TRRH L + E GDG+ A T A E + R +K
Sbjct: 218 TIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAAAATTDAAPAAEKKKKRQRK 273
>Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical
protein W01B6.1 protein.
Length = 360
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -3
Query: 293 GELAPVTRVTRRHQVLSVEHL----LRELGDGERAVLLTAAGCEGSETRNKKVQT-WEW 132
G L P+ ++ R + L E+G + LLT+ GC ET+ K V T W W
Sbjct: 98 GMLGPIHKMATREAAFTYAILSAGVTHEIGRRCKQGLLTSCGC-SDETKPKNVPTDWSW 155
>X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein
protein.
Length = 360
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -3
Query: 293 GELAPVTRVTRRHQVLSVEHL----LRELGDGERAVLLTAAGCEGSETRNKKVQT-WEW 132
G L P+ ++ R + L E+G + LLT+ GC ET+ K V T W W
Sbjct: 98 GMLGPIHKMATREAAFTYAILSAGVTHEIGRRCKQGLLTSCGC-SDETKPKNVPTDWSW 155
>U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical
protein T03F1.6b protein.
Length = 345
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -3
Query: 170 SETRNKKVQTWEWHHVHSQL--AEIRIQLT----GEPEAGGNTRHGQRHQVVQV 27
S R+ ++ T + HV++ L A ++LT EP+ TRHGQ H + +
Sbjct: 158 SSLRHLELSTSDEQHVYADLNIATSSMRLTYHQPAEPKPSEQTRHGQNHSFMYI 211
>U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical
protein T03F1.6a protein.
Length = 342
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -3
Query: 170 SETRNKKVQTWEWHHVHSQL--AEIRIQLT----GEPEAGGNTRHGQRHQVVQV 27
S R+ ++ T + HV++ L A ++LT EP+ TRHGQ H + +
Sbjct: 158 SSLRHLELSTSDEQHVYADLNIATSSMRLTYHQPAEPKPSEQTRHGQNHSFMYI 211
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 314 TAEDGCDGELAPVTRVTRRHQVLSVEHLLRELGDGERAVLLT--AAGCEGSETRNKK 150
T E+ DGE R TRRH L + E GDG+ A T A E + R +K
Sbjct: 218 TIENSGDGETRGKRR-TRRHGKLQPDAPSGEKGDGDAAAATTDAAPAAEKKKKRQRK 273
>U28940-5|AAA68351.1| 156|Caenorhabditis elegans Hypothetical
protein T24H7.3 protein.
Length = 156
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 36 HLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFISGFAPL 176
H + LT G +N D R+L ++ F LH + +PL
Sbjct: 85 HCIELTQKGWRVASNRNDCMNGDFRQLDIHTKYFESLHTLLMDISPL 131
>U00066-4|AAM54165.2| 75|Caenorhabditis elegans Hypothetical
protein R12B2.7 protein.
Length = 75
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 93 LNADLRKLAVNMVPFPRLHFF 155
LN L L++N FP+LHF+
Sbjct: 41 LNDKLISLSINAFSFPKLHFY 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,908,560
Number of Sequences: 27780
Number of extensions: 166951
Number of successful extensions: 495
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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