Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J07
(401 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 101 3e-22
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 99 1e-21
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 94 4e-20
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 81 3e-16
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 81 3e-16
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 77 4e-15
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 75 3e-14
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 38 0.004
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 37 0.007
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 33 0.064
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 33 0.064
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 31 0.26
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 31 0.26
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 31 0.45
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 29 1.4
02_03_0116 - 15440263-15441024,15441097-15443451 29 1.8
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 28 2.4
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 28 2.4
10_08_0620 - 19321612-19323237 27 4.2
07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640 27 4.2
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 27 5.6
12_01_0410 - 3234836-3234958,3235636-3235776,3235899-3235949,323... 27 5.6
04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562... 27 5.6
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 27 7.3
08_02_0866 + 22006822-22006899,22006997-22007080,22007621-220077... 27 7.3
06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066 27 7.3
04_03_0141 + 11767781-11767880,11767953-11769262 27 7.3
04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871 27 7.3
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 27 7.3
03_05_0205 - 21965782-21965979,21969169-21969417 27 7.3
11_04_0466 - 18028169-18028306,18028997-18029306,18029399-180295... 26 9.7
08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642 26 9.7
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 26 9.7
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 26 9.7
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 101 bits (241), Expect = 3e-22
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = +3
Query: 186 FYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGV 365
+ A D++FG + RALML+GV+ LADAV VTMGPKGR V++EQS+G+PK+TKDGVTVA +
Sbjct: 70 YAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSI 129
Query: 366 ELKDKFQNIGA 398
E ++ +N+GA
Sbjct: 130 EFSNRVKNVGA 140
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 99.1 bits (236), Expect = 1e-21
Identities = 50/84 (59%), Positives = 64/84 (76%), Gaps = 10/84 (11%)
Frame = +3
Query: 177 LARFYA-NDVRFGADVRALMLQGVDILADAVAVTMGPK---------GRNVILEQSWGSP 326
L+R YA D++FG + RALML+GV+ LADAV VTMGPK GRNV++EQS+GSP
Sbjct: 28 LSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSP 87
Query: 327 KITKDGVTVANGVELKDKFQNIGA 398
K+TKDGVTVA +E KD+ +N+GA
Sbjct: 88 KVTKDGVTVAKSIEFKDRVKNVGA 111
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 93.9 bits (223), Expect = 4e-20
Identities = 46/74 (62%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +3
Query: 180 ARFYA-NDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 356
AR YA +V FG RA +LQGV+ LADAV VTMGPKGRNVI+E+S +PK+TKDGVTVA
Sbjct: 114 ARGYAAKEVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVA 173
Query: 357 NGVELKDKFQNIGA 398
+E +D +N+GA
Sbjct: 174 KSIEFEDSAKNVGA 187
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 81.0 bits (191), Expect = 3e-16
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +3
Query: 99 PHIFTNNASVCLAVVRQSVTLHKTHQLARFYANDVRFGADVRALM-LQ-GVDILADAVAV 272
P ++ +SV +A ++ L + A ++ F D A+ LQ GV+ LAD V V
Sbjct: 26 PSSLSSVSSVSVASRPRNARLQRKCNFRVKAAKELYFNKDGSAIKKLQTGVNKLADLVGV 85
Query: 273 TMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGAK 401
T+GPKGRNV+LE +GSP+I DGVTVA VEL+D +NIGAK
Sbjct: 86 TLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAK 128
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 81.0 bits (191), Expect = 3e-16
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +3
Query: 192 ANDVRFGADVRAL--MLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGV 365
A ++ F D A+ + GV+ LAD V VT+GPKGRNV+LE +GSPKI DGVTVA V
Sbjct: 53 AKELYFNKDGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV 112
Query: 366 ELKDKFQNIGAK 401
EL+D +NIGAK
Sbjct: 113 ELEDPVENIGAK 124
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 77.4 bits (182), Expect = 4e-15
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +3
Query: 141 VRQSVTLHKTHQLARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG 320
VR++ + R A D+ F RA + GV+ LA+AV VT+GP+GRNV+L++ +G
Sbjct: 22 VRRAKNGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDE-YG 80
Query: 321 SPKITKDGVTVANGVELKDKFQNIGA 398
SPK+ DGVT+A +EL D +N GA
Sbjct: 81 SPKVVNDGVTIARAIELYDPMENAGA 106
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 74.5 bits (175), Expect = 3e-14
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +3
Query: 177 LARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 356
+ R A ++ F R+ + GV+ LA AVAVT+GP+GRNV+L++ +GSPK+ DGVT+A
Sbjct: 39 VVRASAKEIAFDQGSRSSLQAGVEKLAAAVAVTLGPRGRNVVLDE-FGSPKVVNDGVTIA 97
Query: 357 NGVELKDKFQNIGA 398
+EL D +N GA
Sbjct: 98 RAIELADPMENAGA 111
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 37.5 bits (83), Expect = 0.004
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 276 MGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGA 398
+ GRNV+++Q PK+ DG+T+A +EL + ++ GA
Sbjct: 590 LSTSGRNVVIDQD-DVPKVINDGITIAKAIELPNAVEHAGA 629
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 198 DVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVEL 371
D + DVR L + +ADAV ++GP+G + ++ IT DG T+ + + L
Sbjct: 20 DTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSL 77
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 33.5 bits (73), Expect = 0.064
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 249 ILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTV 353
++AD V T+GP+G + ++ G I+ DG T+
Sbjct: 34 VVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATI 68
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 33.5 bits (73), Expect = 0.064
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVANGVEL 371
G R G +AD V T+GPKG + IL QS G S +T DG T+ + +
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI 69
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQN 389
G D + + +A + ++GPKG + +L+ G IT DG T+ +++ ++
Sbjct: 26 GLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAK 85
Query: 390 I 392
+
Sbjct: 86 L 86
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 31.5 bits (68), Expect = 0.26
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVANGVEL 371
G R G ++D V T+GPKG + IL QS G S +T DG T+ + +
Sbjct: 15 GERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI 70
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 30.7 bits (66), Expect = 0.45
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 252 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKD 377
L D + +GPKG +L G K+TKDG T+ +++++
Sbjct: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQN 70
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVEL 371
G V +Q +AD + T+GP+ +L + G +T DG + +++
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDI 72
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 221 KSPNAAGR*HSSGRGCR-HNGSKRQKRDSGAVLGFP*DHKRWSDSR*RGRTERQIP 385
K A R H +G+ C HN S D AV ++W + R + R E + P
Sbjct: 460 KEAGAPSREHPTGKWCTVHNTSLHDLADCRAVKSLAERTRKWEEERRQERREGKAP 515
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 328 LGEPQDCSRITFLPFGPIVTATASARMSTPCSIRALTS--APNLTSFA*NR--ANWC 170
L + + C +T + PIV A + TP +R+L S A +L+ R NWC
Sbjct: 67 LHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWC 123
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVEL 371
G V +Q +AD + T+GP+ +L + G +T DG + ++L
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDL 72
>10_08_0620 - 19321612-19323237
Length = 541
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 198 DVRFGADVRALMLQGVDILADAVAVTMGPKGRN-VILEQSWGSPK---ITKDGVTVANGV 365
D + DVR L + +A A ++GP+G + +I S G + IT DG T+ + +
Sbjct: 20 DTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRM 79
Query: 366 EL 371
L
Sbjct: 80 PL 81
>07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640
Length = 468
Score = 27.5 bits (58), Expect = 4.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 344 SIFCDLRGTPGLLQNHVSAFWTHCDGN 264
S+F L+ PG NH+S ++ H N
Sbjct: 411 SLFDTLKSLPGFKDNHISFYYAHLVAN 437
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 328 LGEPQDCSRITFLPFGPIVTATASARMSTPCSIRALTS--APNLTSFA*NR--ANWC 170
L + + C +T + P+V A + TP +R+L S A +L+ R NWC
Sbjct: 67 LHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWC 123
>12_01_0410 -
3234836-3234958,3235636-3235776,3235899-3235949,
3236045-3236125,3236427-3236483,3236898-3236993,
3237204-3237379,3237630-3237703,3237909-3238016,
3238100-3238236,3238396-3238446,3239032-3239142,
3239291-3239363,3240322-3240398,3240641-3240706,
3241349-3241463,3242255-3242511
Length = 597
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +2
Query: 29 HCAIPVRIFEK*GWILVEILLNHSPY-----IYK*CFGLPRCCSSKCYFTQNTPISAILC 193
H P + E+ W EI++NH PY ++ L +SK + TP+ A +
Sbjct: 448 HFFSPCSLGERMNWDKEEIVINHQPYDNKADVFSFAIVLWELITSKIPYNTMTPLQAAVG 507
Query: 194 KRCEIR 211
R +R
Sbjct: 508 VRQGLR 513
>04_04_0802 -
28155281-28155725,28155750-28156081,28156164-28156266,
28156347-28156528,28156617-28156800,28156872-28156960,
28157634-28157710,28157837-28157927,28158230-28158430
Length = 567
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 98 SPYIYK*CFGLPRCCSSKCYFTQNTPISAILCK 196
+PY YK +PR C++KCY +N + A+L K
Sbjct: 185 TPYPYK--MRIPRKCTAKCY--ENRVLPALLKK 213
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 285 KGRNVILEQSWGSPKITKDGV 347
KG V+ + SWG TKDG+
Sbjct: 103 KGPGVVQDDSWGGLSTTKDGL 123
>08_02_0866 +
22006822-22006899,22006997-22007080,22007621-22007719,
22007864-22007908,22008170-22008265,22009150-22009227,
22009864-22009949,22010038-22010104,22010192-22010254,
22010332-22010433,22010559-22010663,22010748-22010840,
22011380-22011468,22012049-22012268,22012816-22012899,
22013221-22013337,22013399-22013473,22013589-22013675,
22013766-22013828,22014833-22014949,22015231-22015323,
22015794-22015919,22015992-22016092,22016917-22016996,
22017023-22017093,22017200-22017256,22017430-22017573
Length = 839
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 359 VSDCHSIFCDLR--GTPGLLQNHVSAF 285
+S+CHS+FC+ R G++Q +S F
Sbjct: 287 LSECHSLFCEQRLYLIRGMVQQRISEF 313
>06_03_0693 - 23572499-23572618,23572854-23572991,23573855-23575066
Length = 489
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 115 FVNIWGMI*QYFNKNPTLFLEDSYRDRT 32
F + W ++ FN NPT F +D R RT
Sbjct: 442 FRHSWDIV--QFNSNPTTFAQDKLRRRT 467
>04_03_0141 + 11767781-11767880,11767953-11769262
Length = 469
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 248 HSSGRGCRHNGSKRQKRDSGAVLG 319
HSS C H+GS+ + +SG +G
Sbjct: 22 HSSWSSCTHSGSRASEEESGDDVG 45
>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
Length = 398
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 159 LHKTHQLARFYANDVRFGADVRALMLQGVD 248
LH+ ++LAR+ DVR A+ + L G+D
Sbjct: 128 LHEFNRLARYEPEDVRTDAEKQEKFLAGLD 157
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 159 LHKTHQLARFYANDVRFGADVRALMLQGVD 248
LH+ ++LAR+ DVR A+ + L G+D
Sbjct: 201 LHEFNRLARYTPEDVRTDAEKQEKFLAGLD 230
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 264 VAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGA 398
V V G +G Q G P+ +G A VEL KF I A
Sbjct: 37 VGVAPGHRGMAASAGQEGGPPRDFSEGAVRARVVELVKKFDRIDA 81
>11_04_0466 -
18028169-18028306,18028997-18029306,18029399-18029513,
18029596-18029732,18030198-18030520
Length = 340
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 234 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGA 398
L+G+DIL + +T+ K N+++ K+G+ + + QN+ A
Sbjct: 190 LKGMDILDHSALLTVRKKFENMLVFDFHAMTHWPKEGIQAQDSTQAASMMQNVQA 244
>08_02_0063 - 11842013-11842327,11842333-11842608,11842622-11842642
Length = 203
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 51 SSRNKVGFLLKYC*IIPHIFTNNASVCLAV 140
+S+ K+G+L KYC ++P + +A+ + +
Sbjct: 166 TSKCKLGYLFKYCDMVPTVKEIDAATTITI 195
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 147 QSVT--LHKTHQLARFYANDVRFGADVRALMLQGVD 248
+SVT LH+ ++LAR+ DVR G + + L+G++
Sbjct: 161 RSVTEYLHEFNRLARYAPEDVRNGEERQEKFLEGLN 196
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 198 DVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSW 317
D F RA++LQG +IL A+ P+ N+ + W
Sbjct: 162 DQWFPECARAMVLQGAEILFYPTAIGSEPQDNNLDSREHW 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,154,332
Number of Sequences: 37544
Number of extensions: 222106
Number of successful extensions: 639
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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